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14_1009_09_40cm_scaffold_3550

Search features with annotation key words

Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_09_40cm_scaffold_3550_1
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

182..463
DNA (282bp) protein (94aa)
CopG/Arc/MetJ family transcriptional regulator n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Y3X6_9PROT
CopG/Arc/MetJ family transcriptional regulator {ECO:0000313|EMBL:EME67786.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
addiction module antidote protein
14_1009_09_40cm_scaffold_3550_2
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

469..834
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J5PHH8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW10712.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
Plasmid stabilization system protein
14_1009_09_40cm_scaffold_3550_3
unknown

Not on your lists

779..949
DNA (171bp) protein (57aa)

This feature has no annotations

14_1009_09_40cm_scaffold_3550_4
unknown

Not on your lists

comp(990..1184)
DNA (195bp) protein (65aa)

This feature has no annotations

14_1009_09_40cm_scaffold_3550_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1450..1758)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003178BF9
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
14_1009_09_40cm_scaffold_3550_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1950..3842
DNA (1893bp) protein (631aa)
oligoendopeptidase F; K08602 oligoendopeptidase F [EC:3.4.24.-] id=12555859 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
14_1009_09_40cm_scaffold_3550_7
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(3784..4614)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036F67DD
peptidase S16, lon domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
14_1009_09_40cm_scaffold_3550_8
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4709..5989
DNA (1281bp) protein (427aa)
MFS transporter n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI0003681261 rbh
ydjE; sugar transporter
Sugar transporter {ECO:0000313|EMBL:AIJ24926.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
14_1009_09_40cm_scaffold_3550_9
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

5995..7665
DNA (1671bp) protein (557aa)
Amidase (EC:3.5.1.4)
Amidase id=1894697 bin=GWD2_Deltaproteobacteria_55_8 species=Paenibacillus sp. oral taxon 786 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
14_1009_09_40cm_scaffold_3550_10
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

7759..8823
DNA (1065bp) protein (355aa)
Putative integral membrane protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YIC9_THEYD rbh
integral membrane protein rbh
Tax=RBG_13_OP8X_37_8_curated
14_1009_09_40cm_scaffold_3550_11
unknown

Not on your lists

comp(8919..9194)
DNA (276bp) protein (92aa)

This feature has no annotations

14_1009_09_40cm_scaffold_3550_12
unknown

Not on your lists

comp(9397..9825)
DNA (429bp) protein (143aa)

This feature has no annotations

14_1009_09_40cm_scaffold_3550_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

9894..10724
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003680020
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
14_1009_09_40cm_scaffold_3550_14
unknown

Not on your lists

comp(10755..11633)
DNA (879bp) protein (293aa)

This feature has no annotations

14_1009_09_40cm_scaffold_3550_15
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(11741..12070)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000363357E
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
14_1009_09_40cm_scaffold_3550_16
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(12128..12790)
DNA (663bp) protein (221aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
14_1009_09_40cm_scaffold_3550_17
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12962..14188
DNA (1227bp) protein (409aa)
metallophosphoesterase n=1 Tax=Paenibacillus elgii RepID=UPI000248C60E rbh
DNA repair exonuclease
Tax=CG_Solirubrobact_01
14_1009_09_40cm_scaffold_3550_18
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14225..16549
DNA (2325bp) protein (775aa)
SMC domain protein n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L6G0_9BACI
SMC domain protein {ECO:0000313|EMBL:EGL83070.1}; TaxID=986075 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="Caldalkalibacillus thermarum TA2.A1.;"
hypothetical protein
14_1009_09_40cm_scaffold_3550_19
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

16561..16878
DNA (318bp) protein (106aa)
Cupin 2, conserved barrel n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS53_RUBXD
cupin 2 barrel domain-containing protein
Cupin 2, conserved barrel {ECO:0000313|EMBL:ABG05775.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
14_1009_09_40cm_scaffold_3550_20
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

16986..18041
DNA (1056bp) protein (352aa)
Helix-turn-helix, type 11 domain protein id=12555814 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Helix-turn-helix, type 11 domain protein
Tax=RBG_16_Acidobacteria_70_10_curated
14_1009_09_40cm_scaffold_3550_21
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

18105..19001
DNA (897bp) protein (299aa)
id=12554707 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
14_1009_09_40cm_scaffold_3550_22
uncultured Bacteroidetes bacterium, Bacteroidetes, Bacteria

Not on your lists

19015..20394
DNA (1380bp) protein (460aa)
Cystathionine beta-synthase n=1 Tax=uncultured Bacteroidetes bacterium RepID=H5SK43_9BACT rbh
Cystathionine beta-synthase {ECO:0000313|EMBL:BAL56529.1}; TaxID=152509 species="Bacteria; Bacteroidetes; environmental samples.;" source="uncultured Bacteroidetes bacterium.;"
cystathionine beta-synthase
14_1009_09_40cm_scaffold_3550_23
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20827..21693)
DNA (867bp) protein (289aa)
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39PY1_GEOMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB33693.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
14_1009_09_40cm_scaffold_3550_24
R_Deltaproteobacteria_44_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21967..22950
DNA (984bp) protein (328aa)
Cysteine synthase, O-acetylserine (Thiol) lyase B id=3821888 bin=GWA2_Methylomirabilis_73_35 species=Moritella sp. PE36 genus=Moritella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cysM; cysteine synthase B
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_16_curated
14_1009_09_40cm_scaffold_3550_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23025..24791)
DNA (1767bp) protein (589aa)
Tetratricopeptide domain protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5F4_VARPE
hypothetical protein
Tetratricopeptide domain protein {ECO:0000313|EMBL:ADU34760.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
Displaying 25 items

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