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14_1009_16_30cm_scaffold_1727

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_16_30cm_scaffold_1727_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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143..943
DNA (801bp) protein (267aa)
AraC family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3G9_GEMAT
Helix-turn-helix, AraC domain-containing protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_16_30cm_scaffold_1727_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

940..1356
DNA (417bp) protein (139aa)
PAS/PAC sensor signal transduction histidine kinase/response regulator n=1 Tax=Dehalococcoides mccartyi DCMB5 RepID=M1Q0L7_9CHLR
PAS/PAC sensor signal transduction histidine kinase/response regulator
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_16_30cm_scaffold_1727_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

1360..1998
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4S8_GEMAT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_16_30cm_scaffold_1727_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2052..2672
DNA (621bp) protein (207aa)
Uncharacterized protein id=2725082 bin=GWC2_Ignavibacteria_56_12 species=unknown genus=unknown taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
LemA family protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_16_30cm_scaffold_1727_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2677..3732
DNA (1056bp) protein (352aa)
Protease HtpX homolog id=4169646 bin=GWA2_Ignavibacteria_55_11 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
heat shock protein HtpX
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_16_30cm_scaffold_1727_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

3729..5114
DNA (1386bp) protein (462aa)
Glycerol-3-phosphate O-acyltransferase id=1718258 bin=GWB2_Deltaproteobacteria_65_81 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Acyltransferase family protein associated with ethylmalonyl-CoA pathway
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_1009_16_30cm_scaffold_1727_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

5222..6214
DNA (993bp) protein (331aa)
metal dependent phosphohydrolase
Metal dependent phosphohydrolase id=4774439 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_16_30cm_scaffold_1727_8
unknown

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comp(6180..6380)
DNA (201bp) protein (67aa)

This feature has no annotations

14_1009_16_30cm_scaffold_1727_9
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6446..6835
DNA (390bp) protein (130aa)
Hypothetical cytosolic protein id=4481933 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_58_17_curated
14_1009_16_30cm_scaffold_1727_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6835..8280
DNA (1446bp) protein (482aa)
RNA-splicing ligase RtcB n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A8L0_PELCD
tRNA-splicing ligase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_16_30cm_scaffold_1727_11
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(8282..9220)
DNA (939bp) protein (313aa)
Putative uncharacterized protein n=1 Tax=Candidatus Cloacamonas acidaminovorans str. Evry RepID=B0VIN9_CLOAI id=1246962 bin=RBG9 species=Candidatus Cloacimonas acidaminovorans genus=Candidatus Cloacimonas taxon_order=unknown taxon_class=unknown phylum=Cloacimonetes tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=BJP_IG2069_Anaerolineales_43_63
14_1009_16_30cm_scaffold_1727_12
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9217..9915)
DNA (699bp) protein (233aa)
Polysaccharide deacetylase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UJW8_ANASK
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ACG72677.1}; Flags: Precursor;; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
14_1009_16_30cm_scaffold_1727_13
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9912..11018)
DNA (1107bp) protein (369aa)
phosphatidylinositol alpha-mannosyltransferase (EC:2.4.1.57)
Phosphatidylinositol alpha-mannosyltransferase {ECO:0000313|EMBL:ABC82188.1}; EC=2.4.1.57 {ECO:0000313|EMBL:ABC82188.1};; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
Phosphatidylinositol alpha-mannosyltransferase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IKK6_ANADE
14_1009_16_30cm_scaffold_1727_14
unknown

Not on your lists

comp(11705..12211)
DNA (507bp) protein (169aa)

This feature has no annotations

14_1009_16_30cm_scaffold_1727_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12211..12831)
DNA (621bp) protein (207aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_16_30cm_scaffold_1727_16
unknown

Not on your lists

12878..13435
DNA (558bp) protein (186aa)

This feature has no annotations

14_1009_16_30cm_scaffold_1727_17
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13454..15430)
DNA (1977bp) protein (659aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M8_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37188.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
14_1009_16_30cm_scaffold_1727_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15440..17437)
DNA (1998bp) protein (666aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4M8_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37188.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
14_1009_16_30cm_scaffold_1727_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

17762..17962
DNA (201bp) protein (67aa)
cold-shock DNA-binding domain-containing protein
Cold-shock DNA-binding protein family id=2227709 bin=GWB2_Pelobacter_53_15 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_1009_16_30cm_scaffold_1727_20
unknown

Not on your lists

18043..18579
DNA (537bp) protein (179aa)

This feature has no annotations

14_1009_16_30cm_scaffold_1727_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(18584..19519)
DNA (936bp) protein (312aa)
Probable ADP-ribosylglycohydrolase {ECO:0000313|EMBL:CAI50030.1}; EC=3.2.2.- {ECO:0000313|EMBL:CAI50030.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) (Halobacterium; pharaonis).;"
Probable ADP-ribosylglycohydrolase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPC1_NATPD
ADP-ribosylglycohydrolase
14_1009_16_30cm_scaffold_1727_22
Geitlerinema sp. PCC 7407, Geitlerinema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

19551..20405
DNA (855bp) protein (285aa)
Alpha/beta hydrolase fold protein n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9SBJ0_9CYAN
alpha/beta fold family hydrolase
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AFY67997.1}; TaxID=1173025 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Geitlerinema.;" source="Geitlerinema sp. PCC 7407.;"
14_1009_16_30cm_scaffold_1727_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20457..21299)
DNA (843bp) protein (281aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_16_30cm_scaffold_1727_24
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21534..22532
DNA (999bp) protein (333aa)
Putative branched-chain amino acid-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N5_GEMAT
putative branched-chain amino acid-binding protein
Putative branched-chain amino acid-binding protein {ECO:0000313|EMBL:BAH37545.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
14_1009_16_30cm_scaffold_1727_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22529..24232
DNA (1704bp) protein (568aa)
Methyl-accepting chemotaxis protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N4_GEMAT
methyl-accepting chemotaxis protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_16_30cm_scaffold_1727_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(24713..30289)
DNA (5577bp) protein (1859aa)
Cell wall surface anchor family protein n=1 Tax=Streptococcus sanguinis SK1058 RepID=F2CMG6_STRSA
Ig domain protein group 2 domain protein
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:AHG91641.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_1009_16_30cm_scaffold_1727_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(30634..30843)
DNA (210bp) protein (70aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying 27 items

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