ggKbase home page

BD02T64_scaffold_3030

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_3030_1
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1703)
DNA (1701bp) protein (567aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E2C5_9GAMM
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EGV30841.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" sourc
putative Methyl-accepting chemotaxis protein
BD02T64_scaffold_3030_2
Shewanella woodyi, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2341..3405
DNA (1065bp) protein (355aa)
Porin Gram-negative type n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KJ48_SHEWM
porin
Porin Gram-negative type {ECO:0000313|EMBL:ACA87068.1}; Flags: Precursor;; TaxID=392500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="S
BD02T64_scaffold_3030_3
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3491..4402)
DNA (912bp) protein (304aa)
Protein-export membrane protein SecF n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIF3_NEPCE
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter
secF; preprotein translocase subunit SecF
BD02T64_scaffold_3030_4
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4417..6294)
DNA (1878bp) protein (626aa)
preprotein translocase subunit SecD n=1 Tax=Amphritea japonica RepID=UPI00037F1B23
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacterium.;" source="
secD; preprotein translocase subunit SecD
BD02T64_scaffold_3030_5
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6389..6718)
DNA (330bp) protein (110aa)
Sec-system component preprotein translocase subunit n=1 Tax=gamma proteobacterium HdN1 RepID=E1VLQ5_9GAMM
yajC; Sec-system component preprotein translocase subunit
Sec-system component preprotein translocase subunit {ECO:0000313|EMBL:CBL45747.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3030_6
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6809..7921)
DNA (1113bp) protein (371aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
tgt; tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIF0_NEPCE
BD02T64_scaffold_3030_7
Shewanella sp. cp20, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7918..9039)
DNA (1122bp) protein (374aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
S-adenosylmethionine tRNA ribosyltransferase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B41BD1
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
BD02T64_scaffold_3030_8
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9293..9817
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VLQ2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL45744.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3030_9
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9850..10908)
DNA (1059bp) protein (353aa)
Predicted permease YjgP/YjgQ n=1 Tax=gamma proteobacterium HdN1 RepID=E1VLQ1_9GAMM
permease YjgP/YjgQ
Predicted permease YjgP/YjgQ {ECO:0000313|EMBL:CBL45743.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3030_10
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10905..12032)
DNA (1128bp) protein (376aa)
Predicted permease YjgP/YjgQ family n=1 Tax=gamma proteobacterium HdN1 RepID=E1VLQ0_9GAMM
permease YjgP/YjgQ family
Predicted permease YjgP/YjgQ family {ECO:0000313|EMBL:CBL45742.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3030_11
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12292..13779
DNA (1488bp) protein (496aa)
pepA; Leucine aminopeptidase (EC:3.4.11.1) rbh
Probable cytosol aminopeptidase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VLP9_9GAMM rbh
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=83406 specie
BD02T64_scaffold_3030_12
gamma proteobacterium IMCC2047, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13904..14335
DNA (432bp) protein (144aa)
Putative ABC transporter2C ATP-binding protein n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KE10_9GAMM
Putative ABC transporter2C ATP-binding protein {ECO:0000313|EMBL:EGG99393.1}; TaxID=434085 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium IMCC2047.;"
DNA polymerase III, chi subunit superfamily
BD02T64_scaffold_3030_13
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14365..15123
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VLP7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL45739.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3030_14
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15243..18077
DNA (2835bp) protein (945aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Cellvibrio sp. BR RepID=I3I9U7_9GAMM
BD02T64_scaffold_3030_15
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18131..18766
DNA (636bp) protein (212aa)
Rhomboid-like protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VLP4_9GAMM
Rhomboid-like protein
Rhomboid-like protein {ECO:0000313|EMBL:CBL45736.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3030_16
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18852..20540)
DNA (1689bp) protein (563aa)
Probable signal protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VLN6_9GAMM
signal protein
Probable signal protein {ECO:0000313|EMBL:CBL45728.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3030_17
Pseudoalteromonas rubra, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20863..21084
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas rubra ATCC 29570 RepID=U1K8F6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERG43184.1}; TaxID=1117318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseud
hypothetical protein
BD02T64_scaffold_3030_18
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21128..21862)
DNA (735bp) protein (245aa)
Transcriptional regulator n=1 Tax=gamma proteobacterium HdN1 RepID=E1VLN4_9GAMM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBL45726.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_3030_19
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22146..23945
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQV4_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL47196.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
Displaying 19 items

View Taxonomy