ggKbase home page

BD02T64_scaffold_3464

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_3464_1
Alteromonas marina, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88..1359
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Salinimonas chungwhensis RepID=UPI00037D16EA rbh
Integrase {ECO:0000313|EMBL:KHT54454.1}; TaxID=203795 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas marina.;"
integrase family protein
BD02T64_scaffold_3464_2
unknown

Not on your lists

comp(1647..1847)
DNA (201bp) protein (67aa)

This feature has no annotations

BD02T64_scaffold_3464_3
Pseudoalteromonas luteoviolacea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2255..3304
DNA (1050bp) protein (350aa)
HD-GYP domain protein n=1 Tax=Pseudoalteromonas luteoviolacea 2ta16 RepID=V4HIH1_9GAMM
HD-GYP domain protein {ECO:0000313|EMBL:ESP90590.1}; TaxID=1353533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoa
metal dependent phosphohydrolase
BD02T64_scaffold_3464_4
unknown

Not on your lists

3297..3698
DNA (402bp) protein (134aa)

This feature has no annotations

BD02T64_scaffold_3464_5
unknown

Not on your lists

comp(3715..3987)
DNA (273bp) protein (91aa)

This feature has no annotations

BD02T64_scaffold_3464_6
unknown

Not on your lists

comp(3980..4687)
DNA (708bp) protein (236aa)

This feature has no annotations

BD02T64_scaffold_3464_7
unknown

Not on your lists

comp(4675..5100)
DNA (426bp) protein (142aa)

This feature has no annotations

BD02T64_scaffold_3464_8
unknown

Not on your lists

comp(5226..5507)
DNA (282bp) protein (94aa)

This feature has no annotations

BD02T64_scaffold_3464_9
unknown

Not on your lists

6680..6883
DNA (204bp) protein (68aa)

This feature has no annotations

BD02T64_scaffold_3464_10

Not on your lists

7063..7611
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Catenovulum agarivorans RepID=UPI0002E3EDC3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKM24303.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
site-specific recombinase, DNA invertase Pin
BD02T64_scaffold_3464_11
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7597..8079)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037D3DC3
Uncharacterized protein {ECO:0000313|EMBL:KGJ95223.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_3464_12
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8087..8809)
DNA (723bp) protein (241aa)
XRE family transcriptional regulator n=1 Tax=Colwellia piezophila RepID=UPI00037B5E0B
umuC1; umuC protein
UmuC protein {ECO:0000313|EMBL:AAZ26070.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (strain
BD02T64_scaffold_3464_13
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8822..9340)
DNA (519bp) protein (173aa)
XRE family transcriptional regulator n=1 Tax=Colwellia piezophila RepID=UPI00037B5E0B
umuC1; umuC protein
UmuC protein {ECO:0000313|EMBL:AAZ26070.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (strain
BD02T64_scaffold_3464_14
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9328..9741)
DNA (414bp) protein (138aa)
umuD1; umuD protein (EC:3.4.21.-)
UmuD protein {ECO:0000313|EMBL:AAZ24694.1}; EC=3.4.21.- {ECO:0000313|EMBL:AAZ24694.1};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;
UmuD protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q484Z2_COLP3 rbh
BD02T64_scaffold_3464_15
unknown

Not on your lists

comp(10145..11197)
DNA (1053bp) protein (351aa)

This feature has no annotations

BD02T64_scaffold_3464_16
Photobacterium iliopiscarium, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11670..12125)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Vibrio owensii RepID=UPI000378DBDB rbh
Uncharacterized protein {ECO:0000313|EMBL:KJG19294.1}; TaxID=56192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium iliopisca
hypothetical protein
BD02T64_scaffold_3464_17
Arcobacter sp. L, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

12212..13048
DNA (837bp) protein (279aa)
TonB-dependent receptor protein n=1 Tax=Arcobacter sp. L RepID=G2HUA6_9PROT rbh
TonB-dependent receptor protein
TonB-dependent receptor protein {ECO:0000313|EMBL:BAK72709.1}; TaxID=944547 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcob
BD02T64_scaffold_3464_18
unknown

Not on your lists

13057..13140
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 18 items

View Taxonomy