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BD02T64_scaffold_3836

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_3836_1
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..428)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GRA2_9GAMM
Polyketide cyclase/dehydrase {ECO:0000313|EMBL:KGJ90941.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrery
hypothetical protein
BD02T64_scaffold_3836_2
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(509..1156)
DNA (648bp) protein (216aa)
Putative TetR-family transcriptional regulator n=1 Tax=Osedax symbiont Rs2 RepID=S6GL72_9GAMM rbh
Putative TetR-family transcriptional regulator {ECO:0000313|EMBL:EPJ49948.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;
TetR family transcriptional regulator
BD02T64_scaffold_3836_3
unknown

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comp(1501..1719)
DNA (219bp) protein (73aa)

This feature has no annotations

BD02T64_scaffold_3836_4
Pseudoalteromonas rubra, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2324..3082
DNA (759bp) protein (253aa)
Oxidoreductase n=1 Tax=Pseudoalteromonas rubra ATCC 29570 RepID=U1LPZ9_9GAMM rbh
Oxidoreductase {ECO:0000313|EMBL:ERG44352.1}; TaxID=1117318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromo
oxidoreductase
BD02T64_scaffold_3836_5
Vibrio brasiliensis, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3167..3607)
DNA (441bp) protein (147aa)
Putative acetyltransferase n=1 Tax=Vibrio brasiliensis LMG 20546 RepID=E8LXZ8_9VIBR
Putative acetyltransferase {ECO:0000313|EMBL:EGA64371.1}; TaxID=945543 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio brasiliensis LMG 2054
Histone acetyltransferase HPA2-like acetyltransferase
BD02T64_scaffold_3836_6
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3689..4921)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NIK3_DESSD rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ89837.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein rbh
BD02T64_scaffold_3836_7
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5166..6539
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6HJM7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ45237.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
GntR family transcriptional regulator
BD02T64_scaffold_3836_8
Vibrio splendidus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6798..7205)
DNA (408bp) protein (136aa)
Cytidine deaminase {ECO:0000313|EMBL:EGU44743.1}; EC=3.5.4.5 {ECO:0000313|EMBL:EGU44743.1};; TaxID=1051645 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;"
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=2 Tax=Vibrio parahaemolyticus RepID=E1EIJ6_VIBPH rbh
BD02T64_scaffold_3836_9
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7392..7976)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GRB6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ49993.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
putative signal transduction protein with Nacht domain
BD02T64_scaffold_3836_10
Photorhabdus temperata, Photorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8089..8457)
DNA (369bp) protein (123aa)
Var1 n=2 Tax=Xenorhabdus nematophila RepID=D3VAR5_XENNA rbh
Uncharacterized protein {ECO:0000313|EMBL:AKH65269.1}; TaxID=230089 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Photorhabdus.;" source="Photorhabdus
var; Var1
BD02T64_scaffold_3836_11
Psychromonas ingrahamii, Psychromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8541..9011)
DNA (471bp) protein (157aa)
GCN5-related N-acetyltransferase n=1 Tax=Psychromonas ingrahamii (strain 37) RepID=A1SRK4_PSYIN rbh
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABM02119.1}; TaxID=357804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Psychromonadaceae; Psychromonas.;" source="Psychro
BD02T64_scaffold_3836_12
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9351..9746
DNA (396bp) protein (132aa)
Response regulator receiver protein n=1 Tax=Osedax symbiont Rs2 RepID=S6HLU7_9GAMM rbh
Response regulator receiver protein {ECO:0000313|EMBL:EPJ49992.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="O
response regulator receiver domain-containing protein
BD02T64_scaffold_3836_13
Moritella sp. PE36, Moritella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9998..11413)
DNA (1416bp) protein (472aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=58051 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Moritellaceae; Mori
Two component sensor histidine kinase n=1 Tax=Moritella sp. PE36 RepID=A6F7S8_9GAMM rbh
histidine kinase
BD02T64_scaffold_3836_14
Grimontia sp. AD028, Grimontia, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11391..12071)
DNA (681bp) protein (227aa)
Two component response regulator n=1 Tax=Moritella sp. PE36 RepID=A6F7S9_9GAMM rbh
Transcriptional regulator {ECO:0000313|EMBL:KKD58026.1}; TaxID=1581149 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grimontia.;" source="Grimontia sp. AD028.;"
transcriptional regulator
BD02T64_scaffold_3836_15
Moritella sp. PE36, Moritella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12234..12731
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6F7T0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EDM69019.1}; TaxID=58051 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Moritellaceae; Moritella.;" source="Moritella sp. PE36.;"
extracellular protein containing 35aa signal peptide
BD02T64_scaffold_3836_16
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12853..13998)
DNA (1146bp) protein (382aa)
Saccharopine dehydrogenase (NADP+, L-glutamate forming) n=1 Tax=Osedax symbiont Rs2 RepID=S6GRB3_9GAMM rbh
Saccharopine dehydrogenase (NADP+, L-glutamate forming) {ECO:0000313|EMBL:EPJ49988.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospiri
putative saccharopine reductase
BD02T64_scaffold_3836_17
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14202..15254)
DNA (1053bp) protein (351aa)
Proline racemase n=1 Tax=Osedax symbiont Rs2 RepID=S6HLU2_9GAMM rbh
Proline racemase {ECO:0000313|EMBL:EPJ49987.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbiont Rs2.
proline racemase
BD02T64_scaffold_3836_18
Reinekea blandensis, Reinekea, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15493..16107)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BK96_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR07463.1}; TaxID=314283 species="Bacteria; Proteobacteria; Gammaproteobacteria; Reinekea.;" source="Reinekea blandensis MED297.;"
hypothetical protein
BD02T64_scaffold_3836_19
unknown

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16280..16486
DNA (207bp) protein (69aa)

This feature has no annotations

BD02T64_scaffold_3836_20
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16434..17438)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6HJ46_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPJ48897.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
hypothetical protein
BD02T64_scaffold_3836_21
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17513..17836)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GPR8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ48898.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
BD02T64_scaffold_3836_22
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18312..18644)
DNA (333bp) protein (111aa)
Uncharacterized protein n=3 Tax=Vibrio nigripulchritudo RepID=U4EMN5_9VIBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO61711.1}; TaxID=28173 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio nigripulchritudo.;"
Displaying 22 items

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