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BD02T64_scaffold_3870

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_3870_1
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..263)
DNA (261bp) protein (87aa)
30S ribosomal protein S1 n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRR9_9GAMM
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MOLA455.;"
rpsA; 30S ribosomal protein S1
BD02T64_scaffold_3870_2

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comp(456..1145)
DNA (690bp) protein (230aa)
cmk; cytidylate kinase (EC:2.7.4.14)
cytidylate kinase n=1 Tax=Pseudomonas thermotolerans RepID=UPI00035E4A4F
Uncharacterized protein {ECO:0000313|EMBL:KKL28395.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BD02T64_scaffold_3870_3
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1142..3388)
DNA (2247bp) protein (749aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|RuleBase:RU000531, ECO:0000256|SAAS:SAAS00240549}; EC=2.5.1.19 {ECO:0000256|RuleBase:RU000531, ECO:0000256|SAAS:SAAS00240533};; TaxID=1411685
bifunctional cyclohexadienyl dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRS1_9GAMM
BD02T64_scaffold_3870_4
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3488..4594)
DNA (1107bp) protein (369aa)
Chorismate mutase/prephenate dehydratase n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KIE0_SIMAS
Prephenate dehydratase {ECO:0000313|EMBL:KJS04122.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
chorismate mutase/prephenate dehydratase
BD02T64_scaffold_3870_5
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4775..7183)
DNA (2409bp) protein (803aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacte
DNA gyrase subunit A n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KUY1_SIMAS
DNA gyrase subunit A
Novel not CPR Jill Banfield (8/29/16)
BD02T64_scaffold_3870_6
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7390..8715
DNA (1326bp) protein (442aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Cellvibrio sp. BR RepID=I3ID31_9GAMM
N-ethylammeline chlorohydrolase
BD02T64_scaffold_3870_7
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

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8780..9301
DNA (522bp) protein (174aa)
ubiG1; 3-demethylubiquinone-9 3-methyltransferas (EC:2.1.1.64)
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YDR9_9GAMM
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiqui
BD02T64_scaffold_3870_8

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9506..10171
DNA (666bp) protein (222aa)
Predicted phosphatase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YDS0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKM23828.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
HAD-superfamily hydrolase
BD02T64_scaffold_3870_9
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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10226..10981
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Halomonas boliviensis LC1 RepID=G9EGP5_9GAMM
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KJS04117.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
3-oxoacyl-ACP reductase
BD02T64_scaffold_3870_10
unknown

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11013..11435
DNA (423bp) protein (141aa)

This feature has no annotations

BD02T64_scaffold_3870_11
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(11559..13016)
DNA (1458bp) protein (486aa)
cardiolipin synthetase 2 (EC:2.7.8.-)
Cardiolipin synthase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C2B2_9PLAN
Cardiolipin synthase {ECO:0000313|EMBL:EDL61204.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
BD02T64_scaffold_3870_12
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(13009..13764)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TTC2_METAC
Uncharacterized protein {ECO:0000313|EMBL:AKB17192.1}; TaxID=1434103 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
hypothetical protein
BD02T64_scaffold_3870_13
Rhodopirellula sp. SWK7, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(13757..15148)
DNA (1392bp) protein (464aa)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetace
Glutamate decarboxylase beta n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5T4N5_9PLAN
glutamate decarboxylase
BD02T64_scaffold_3870_14
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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15358..16881
DNA (1524bp) protein (508aa)
AMP-binding protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J550_9PROT
AMP-binding protein {ECO:0000313|EMBL:EKE78146.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum ind
AMP-binding protein
BD02T64_scaffold_3870_15
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(16983..17921)
DNA (939bp) protein (313aa)
short-chain dehydrogenase/reductase SDR n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E947
short-chain dehydrogenase/reductase SDR Tax=RBG_16_Chloroflexi_68_14_curated
peroxisomal multifunctional enzyme type 2
BD02T64_scaffold_3870_16

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18142..19368
DNA (1227bp) protein (409aa)
Alpha-methylacyl-CoA racemase n=1 Tax=uncultured bacterium F41-01 RepID=I3VIN9_9BACT
Alpha-methylacyl-CoA racemase {ECO:0000313|EMBL:AFK79245.1}; TaxID=1191437 species="Bacteria; environmental samples.;" source="uncultured bacterium F41-01.;"
L-carnitine dehydratase/bile acid-inducible protein F
BD02T64_scaffold_3870_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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19407..20150
DNA (744bp) protein (248aa)
gluconate 5-dehydrogenase (EC:1.1.1.69)
gluconate dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
Short-chain dehydrogenase/reductase SDR id=4036717 bin=GWF2_Methylomirabilis_70_14 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
BD02T64_scaffold_3870_18
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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20268..20933
DNA (666bp) protein (222aa)
Beta-lactamase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VKU7_9EURY
Beta-lactamase {ECO:0000313|EMBL:ELY37825.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;"
beta-lactamase
BD02T64_scaffold_3870_19
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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20926..21276
DNA (351bp) protein (117aa)
Beta-lactamase domain protein {ECO:0000313|EMBL:ADB62660.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica
BD02T64_scaffold_3870_20
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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21378..22169
DNA (792bp) protein (264aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWG5_PARL1
Enoyl-CoA hydratase {ECO:0000313|EMBL:GAK46052.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
enoyl-CoA hydratase
BD02T64_scaffold_3870_21
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(22585..25017)
DNA (2433bp) protein (811aa)
RND transporter n=1 Tax=Salinimonas chungwhensis RepID=UPI0003738E64
hypothetical protein; K07003 Tax=RBG_13_Acidobacteria_68_16_curated
hypothetical protein
BD02T64_scaffold_3870_22
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25126..26040)
DNA (915bp) protein (305aa)
Ycf48-like proteinPrecursor n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7J033_PSEPS
Strain MEJ086 contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ04435.1}; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
hypothetical protein
Displaying 22 items

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