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BD02T64_scaffold_120

Search features with annotation key words

Displaying items 1-30 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_120_1
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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76..630
-----------------
DNA (555bp)
protein (185aa)
ADP-ribose diphosphatase NudE n=1 Tax=Cellvibrio sp. BR RepID=I3IDF4_9GAMM
ADP-ribose diphosphatase NudE {ECO:0000313|EMBL:EIK46089.1}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio s
nudE; ADP-ribose diphosphatase NudE
BD02T64_scaffold_120_2
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

691..1551
-----------------
DNA (861bp)
protein (287aa)
3''''-5''''-bisphosphate nucleotidase n=1 Tax=Microbulbifer agarilyticus RepID=UPI0002558DC4
thioredoxin
Thioredoxin {ECO:0000313|EMBL:AFU99790.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 /;
BD02T64_scaffold_120_3
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1573..3972)
-----------------
DNA (2400bp)
protein (800aa)
hypothetical protein n=1 Tax=Gilvimarinus chinensis RepID=UPI00036A5FFE
Peptidase {ECO:0000313|EMBL:KJS09245.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
penicillin-binding protein
BD02T64_scaffold_120_4
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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4133..5200
-----------------
DNA (1068bp)
protein (356aa)
Response regulator receiver domain-containing protein n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KLM7_SIMAS
Pilus assembly protein PilM {ECO:0000313|EMBL:KJS09244.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
response regulator receiver domain-containing protein
BD02T64_scaffold_120_5
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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5203..5772
-----------------
DNA (570bp)
protein (190aa)
Tfp pilus assembly protein PilN n=1 Tax=Congregibacter litoralis KT71 RepID=A4A8K0_9GAMM
Pilus assembly protein PilN {ECO:0000313|EMBL:KJS09243.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
sensor signal transduction histidine kinase
BD02T64_scaffold_120_6
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5772..6383
-----------------
DNA (612bp)
protein (204aa)
Type 4 fimbrial biogenesis protein PilO n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KJZ2_9GAMM
Pilus assembly protein PilP {ECO:0000313|EMBL:KJS09242.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
type 4 fimbrial biogenesis protein PilO
BD02T64_scaffold_120_7
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6386..6922
-----------------
DNA (537bp)
protein (179aa)
pilus assembly protein PilP n=1 Tax=Pseudomonas mendocina RepID=UPI00036A1645
Pilus assembly protein PilP {ECO:0000313|EMBL:KJS09241.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
pilP; type 4 fimbrial biogenesis protein PilP
BD02T64_scaffold_120_8
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6922..9120
-----------------
DNA (2199bp)
protein (733aa)
Type 4 fimbrial biogenesis protein PilQ n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YS04_9GAMM
Fimbrial protein {ECO:0000313|EMBL:KJS09262.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
peptidase M41, FtsH
BD02T64_scaffold_120_9
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9117..9638
-----------------
DNA (522bp)
protein (174aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1411685 species="Bacteria; Proteobacteria; Gammap
Shikimate kinase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YS03_9GAMM
shikimate kinase
BD02T64_scaffold_120_10
Bermanella marisrubri, Bermanella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9713..10783
-----------------
DNA (1071bp)
protein (357aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=207949 species="Bacteria
3-dehydroquinate synthase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000380F7BC
3-dehydroquinate synthase
BD02T64_scaffold_120_11
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10907..15364
-----------------
DNA (4458bp)
protein (1486aa)
Glutamate synthase {ECO:0000313|EMBL:KJS09238.1}; EC=1.4.1.13 {ECO:0000313|EMBL:KJS09238.1};; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacter
gltB; glutamate synthase subunit alpha (EC:1.4.1.13)
Glutamate synthase large chain n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YS01_9GAMM
BD02T64_scaffold_120_12
Bermanella marisrubri, Bermanella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15409..16827
-----------------
DNA (1419bp)
protein (473aa)
glutamate synthase subunit beta n=1 Tax=Microbulbifer variabilis RepID=UPI00036109EC
NADPH-dependent glutamate synthase beta chain and related oxidoreductase {ECO:0000313|EMBL:EAT12418.1}; TaxID=207949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Bermanel
glutamate synthase subunit beta
BD02T64_scaffold_120_13
Pseudomonas sp. 5, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16820..17884
-----------------
DNA (1065bp)
protein (355aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
Uroporphyrinogen decarboxylase n=1 Tax=Pseudomonas putida (strain DOT-T1E) RepID=I7C312_PSEPT
uroporphyrinogen decarboxylase
BD02T64_scaffold_120_14
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18060..19472
-----------------
DNA (1413bp)
protein (471aa)
HD domain protein n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PDU0_CELJU
Uncharacterized protein {ECO:0000313|EMBL:KJS09235.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
HD domain-containing protein
BD02T64_scaffold_120_15
Chromohalobacter salexigens, Chromohalobacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19494..20294)
-----------------
DNA (801bp)
protein (267aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000255|HAMAP-Rule:MF_00662}; EC=4.1.1.65 {ECO:0000255|HAMAP-Rule:MF_00662};; Contains:; Phosphatidylserine decarboxylase alpha chain {ECO:0000255|HAMAP
phosphatidylserine decarboxylase n=1 Tax=Pseudomonas caeni RepID=UPI0003B39B8A
phosphatidylserine decarboxylase
BD02T64_scaffold_120_16
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20440..21447)
-----------------
DNA (1008bp)
protein (336aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudom
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U3BA54_PSEAC
GTPase RsgA
BD02T64_scaffold_120_17
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21526..22599
-----------------
DNA (1074bp)
protein (358aa)
Mechanosensitive ion channel protein MscS n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAK8_9PROT
mechanosensitive ion channel protein MscS
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:BAN36035.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source=
BD02T64_scaffold_120_18
Acinetobacter johnsonii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22586..23122
-----------------
DNA (537bp)
protein (179aa)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=575586 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae;
orn; oligoribonuclease (EC:3.1.-.-)
Oligoribonuclease n=3 Tax=Acinetobacter johnsonii RepID=D0SGD1_ACIJO
BD02T64_scaffold_120_19
Marinobacter manganoxydans, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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23190..24827
-----------------
DNA (1638bp)
protein (546aa)
Cyclohexanecarboxylate-CoA ligase n=1 Tax=Marinobacter manganoxydans MnI7-9 RepID=G6YYP5_9ALTE rbh
Cyclohexanecarboxylate-CoA ligase {ECO:0000313|EMBL:EHJ02848.1}; TaxID=1094979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marino
short chain acyl-CoA synthetase
BD02T64_scaffold_120_20
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24905..26065
-----------------
DNA (1161bp)
protein (387aa)
Acyl-CoA dehydrogenase-like n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q120B0_POLSJ
acyl-CoA dehydrogenase-like
Acyl-CoA dehydrogenase-like {ECO:0000313|EMBL:ABE47132.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (
BD02T64_scaffold_120_21
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26187..27092)
-----------------
DNA (906bp)
protein (302aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI0002DB42F0 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAU92320.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus ca
BD02T64_scaffold_120_22
Tetraselmis sp. GSL018, Tetraselmis, Chlorodendrales, Chlorodendrophyceae, Chlorophyta, Viridiplantae

Not on your lists

27279..27761
-----------------
DNA (483bp)
protein (161aa)
Redoxin domain-containing protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JFI4_9PROT
Peroxiredoxin 5, atypical 2-Cys peroxiredoxin {ECO:0000313|EMBL:JAC80025.1}; TaxID=582737 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorodendrophyceae; Chlorodendrales; Chlorodendraceae; Tetras
redoxin domain-containing protein
BD02T64_scaffold_120_23
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28008..29657
-----------------
DNA (1650bp)
protein (550aa)
Cyclohexanone monooxygenase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NW53_9DELT
Cyclohexanone monooxygenase {ECO:0000313|EMBL:EPX56445.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source
cyclohexanone monooxygenase
BD02T64_scaffold_120_24
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29752..30342)
-----------------
DNA (591bp)
protein (197aa)
MutT/nudix family protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KQ98_9GAMM rbh
NUDIX hydrolase Tax=CG_Delta_07
NUDIX hydrolase
BD02T64_scaffold_120_25
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30605..30937
-----------------
DNA (333bp)
protein (111aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y9M6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAW32830.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143.;"
hypothetical protein
BD02T64_scaffold_120_26
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31039..31833)
-----------------
DNA (795bp)
protein (265aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium IMCC14465 RepID=J9DJ88_9PROT
Uncharacterized protein {ECO:0000313|EMBL:ETR77281.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
BD02T64_scaffold_120_27

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32019..33767
-----------------
DNA (1749bp)
protein (583aa)
sulfate permease n=1 Tax=Nevskia ramosa RepID=UPI0003B3F64D
Uncharacterized protein {ECO:0000313|EMBL:KKN29643.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sulfate transporter
BD02T64_scaffold_120_28
unknown

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comp(33788..34231)
-----------------
DNA (444bp)
protein (148aa)

This feature has no annotations

BD02T64_scaffold_120_29
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(34331..35128)
-----------------
DNA (798bp)
protein (266aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0ATH1_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ16119.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
enoyl-CoA hydratase/isomerase
BD02T64_scaffold_120_30

Not on your lists

35334..36101
-----------------
DNA (768bp)
protein (256aa)
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJG2_9CHLR rbh
Marine sediment metagenome DNA, contig: S06H3_C02011 {ECO:0000313|EMBL:GAI02013.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
short-chain dehydrogenase/reductase SDR
Displaying items 1-30 of 113 in total

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