ggKbase home page

BD02T64_scaffold_373

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_373_1
unknown

Not on your lists

comp(2..70)
DNA (69bp) protein (23aa)

This feature has no annotations

BD02T64_scaffold_373_2
unknown

Not on your lists

690..971
DNA (282bp) protein (94aa)

This feature has no annotations

BD02T64_scaffold_373_3
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1030..1215)
DNA (186bp) protein (62aa)
Putative transcriptional regulator, Fis family protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3J7Z9_9ALTE
site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:AJQ95491.1}; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales; Gynuella.;" sourc
BD02T64_scaffold_373_4
Marinobacter sp. BSs20148, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1419..1619
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Marinobacter sp. BSs20148 RepID=M1FHB3_9ALTE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFP32725.1}; TaxID=490759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp.
BD02T64_scaffold_373_5
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1951..2955)
DNA (1005bp) protein (335aa)
Rhodopsin-like GPCR superfamily protein n=1 Tax=Oleispira antarctica RB-8 RepID=R4YLY4_OLEAN
Rhodopsin-like GPCR superfamily protein {ECO:0000313|EMBL:CCK75777.1}; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleispira.;" source="Oleispira antarctica
hypothetical protein
BD02T64_scaffold_373_6
Marinomonas profundimaris, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3322..4521
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI00035E4DFB rbh
RNA helicase {ECO:0000313|EMBL:ETI60484.1}; TaxID=1208321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas profundimaris.;"
DEAD/DEAH box helicase
BD02T64_scaffold_373_7
unknown

Not on your lists

4700..4849
DNA (150bp) protein (50aa)

This feature has no annotations

BD02T64_scaffold_373_8
unknown

Not on your lists

4849..4962
DNA (114bp) protein (38aa)

This feature has no annotations

BD02T64_scaffold_373_9
unknown

Not on your lists

comp(5214..5393)
DNA (180bp) protein (60aa)

This feature has no annotations

BD02T64_scaffold_373_10
Glaciecola punicea, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5812..6033
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Glaciecola punicea DSM 14233 = ACAM 611 RepID=H5T919_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:GAB54796.1}; TaxID=1121923 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola punicea
BD02T64_scaffold_373_11
Denitrovibrio acetiphilus, Denitrovibrio, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

6379..7413
DNA (1035bp) protein (345aa)
Nuclease-like protein n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KSU1_9SYNC rbh
NERD domain-containing protein
NERD domain protein {ECO:0000313|EMBL:ADD67493.1}; TaxID=522772 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Denitrovibrio.;" source="Denitrovibrio acetiphilus (strain DS
BD02T64_scaffold_373_12
Marinomonas mediterranea, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7528..8658)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1) RepID=F2JZW6_MARM1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADZ92078.1}; TaxID=717774 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas mediterranea (strain A
BD02T64_scaffold_373_13
Cylindrospermum stagnale, Cylindrospermum, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(9181..9552)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036EF67E
truncated hemoglobin
Truncated hemoglobin {ECO:0000313|EMBL:AFZ24987.1}; TaxID=56107 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermum.;" source="Cylindrospermum stagnale PCC 7417.;"
BD02T64_scaffold_373_14
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10112..10894
DNA (783bp) protein (261aa)
D-beta-hydroxybutyrate dehydrogenase protein n=2 Tax=Cycloclasticus RepID=K0C2T4_CYCSP rbh
bdhA; D-beta-hydroxybutyrate dehydrogenase protein
D-beta-hydroxybutyrate dehydrogenase protein {ECO:0000313|EMBL:AFT66818.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" s
BD02T64_scaffold_373_15
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10996..12093
DNA (1098bp) protein (366aa)
alpha/beta hydrolase n=1 Tax=Cycloclasticus pugetii RepID=UPI000380219F rbh
alpha-beta hydrolase superfamily esterase
Esterase of the alpha-beta hydrolase superfamily, Patatin-like phospholipase domain protein {ECO:0000313|EMBL:AFT66819.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotric
BD02T64_scaffold_373_16
unknown

Not on your lists

comp(12319..12753)
DNA (435bp) protein (145aa)

This feature has no annotations

BD02T64_scaffold_373_17
Alishewanella agri, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12822..13367)
DNA (546bp) protein (182aa)
Uncharacterized protein n=2 Tax=Alishewanella RepID=I9P2U3_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:EIW89232.1}; TaxID=1195246 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella a
hypothetical protein
BD02T64_scaffold_373_18
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

13853..14563
DNA (711bp) protein (237aa)
TonB-dependent receptor id=4802606 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein Tax=GWC2_Nitrospirae_56_14_curated
TonB-dependent receptor
BD02T64_scaffold_373_19
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14605..15852
DNA (1248bp) protein (416aa)
TonB-dependent receptor n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z1X8_DESAT
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ADH85553.1}; TaxID=589865 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfurivibrio.;" source="Desulfurivib
BD02T64_scaffold_373_20
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15968..17401
DNA (1434bp) protein (478aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00037DA791 rbh
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:EDY81150.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verru
NodT family RND efflux system outer membrane lipoprotein
BD02T64_scaffold_373_21
Agarivorans albus, Agarivorans, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17398..18624
DNA (1227bp) protein (409aa)
Membrane-fusion protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017446E9 rbh
Putative Secretion protein {ECO:0000313|EMBL:GAD00069.1}; TaxID=1331007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Agarivorans.;" source="Agarivorans al
secretion protein
BD02T64_scaffold_373_22
Pseudoalteromonas agarivorans, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18624..21752
DNA (3129bp) protein (1043aa)
acriflavine resistance protein B n=1 Tax=Pseudoalteromonas haloplanktis RepID=UPI000315ADE0
Multidrug resistance protein AcrB/AcrD/AcrF {ECO:0000313|EMBL:ENN96942.1}; TaxID=1307437 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromo
acriflavin resistance protein
BD02T64_scaffold_373_23
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22019..22882)
DNA (864bp) protein (288aa)
membrane protein n=1 Tax=Vibrio gazogenes RepID=UPI0003940BEE
Membrane protein {ECO:0000313|EMBL:KJE43283.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actiniarum.;
hypothetical protein
BD02T64_scaffold_373_24
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23007..23633)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00037998C0 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC62055.1}; TaxID=572477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosu
BD02T64_scaffold_373_25
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24029..24415
DNA (387bp) protein (129aa)
Putative transcriptional regulator, Fis family protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3J7Z9_9ALTE
site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:AJQ95491.1}; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales; Gynuella.;" sourc
BD02T64_scaffold_373_26
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25091..27445)
DNA (2355bp) protein (785aa)
Outer membrane adhesin-like protein n=1 Tax=Cycloclasticus sp. (strain P1) RepID=K0C7H1_CYCSP rbh
outer membrane adhesin-like protein
Outer membrane adhesin-like protein {ECO:0000313|EMBL:AFT67637.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cy
BD02T64_scaffold_373_27
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28040..28960)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H9T5_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:ERF81216.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
alpha/beta hydrolase fold protein
BD02T64_scaffold_373_28
Catenovulum agarivorans, Catenovulum, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28988..29563)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI00036EC2F2 rbh
Glutathione S-transferase {ECO:0000313|EMBL:EWH11354.1}; TaxID=1328313 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Catenovulum.;" source="Catenovulum aga
glutathione S-transferase
BD02T64_scaffold_373_29
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29891..30610
DNA (720bp) protein (240aa)
short chain dehydrogenase-like protein n=1 Tax=Paenibacillus larvae RepID=UPI0001693BF8 rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KIE43093.1}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;
hypothetical protein
BD02T64_scaffold_373_30
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30645..32153
DNA (1509bp) protein (503aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W413_MAGSA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE51412.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Ma
Displaying items 1-30 of 62 in total

View Taxonomy