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BD02T64_scaffold_383

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Displaying items 1-30 of 36 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_383_1
unknown

Not on your lists

comp(152..940)
DNA (789bp) protein (263aa)

This feature has no annotations

BD02T64_scaffold_383_2
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1091..3745)
DNA (2655bp) protein (885aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.
ppc; phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YCY0_9GAMM rbh
BD02T64_scaffold_383_3
Marinobacter similis, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3767..5269)
DNA (1503bp) protein (501aa)
Diguanylate cyclase n=1 Tax=Marinobacter sp. EVN1 RepID=U7NMJ0_9ALTE
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AHI29389.1}; TaxID=1420916 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter similis
BD02T64_scaffold_383_4
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5413..6030)
DNA (618bp) protein (206aa)
Two-component response regulator n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GU06_9PROT
Two-component response regulator {ECO:0000313|EMBL:EKV28627.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Cae
XRE family transcriptional regulator
BD02T64_scaffold_383_5
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6275..7189)
DNA (915bp) protein (305aa)
Permease n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2GIK6_9GAMM
AEC family transporter
AEC family transporter {ECO:0000313|EMBL:AJD47766.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax pacif
BD02T64_scaffold_383_6
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7304..9376
DNA (2073bp) protein (691aa)
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=1 Tax=gamma proteobacterium HdN1 RepID=E1VP73_9GAMM rbh
hypothetical protein
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein
BD02T64_scaffold_383_7
Bermanella marisrubri, Bermanella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9572..12340
DNA (2769bp) protein (923aa)
sensor histidine kinase/response regulator (EC:2.7.3.-)
Probable sensor/response regulator hybrid n=1 Tax=Bermanella marisrubri RepID=Q1N363_9GAMM
Probable sensor/response regulator hybrid {ECO:0000313|EMBL:EAT12728.1}; TaxID=207949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Bermanella.;" source="Bermanella marisr
BD02T64_scaffold_383_8
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12309..13106)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VIE2_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL44584.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_383_9
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13120..14592)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VIE1_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL44583.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_383_10
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14589..17339)
DNA (2751bp) protein (917aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VID9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL44581.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_383_11
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17332..24105)
DNA (6774bp) protein (2258aa)
Similar to linear gramicidin synthetase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VID8_9GAMM rbh
linear gramicidin synthetase
Similar to linear gramicidin synthetase {ECO:0000313|EMBL:CBL44580.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_383_12
Gloeocapsa sp. PCC 73106, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(24102..28670)
DNA (4569bp) protein (1523aa)
polyketide synthase (EC:2.3.1.94 1.6.5.5)
Beta-ketoacyl synthase/acyltransferase n=1 Tax=Gloeocapsa sp. PCC 73106 RepID=L8LMU6_9CHRO
Beta-ketoacyl synthase/acyltransferase {ECO:0000313|EMBL:ELR97465.1}; TaxID=102232 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7310
BD02T64_scaffold_383_13
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28732..39897)
DNA (11166bp) protein (3722aa)
Erythronolide synthase, modules 3 and 4 {ECO:0000313|EMBL:CBL44578.1}; EC=2.3.1.94 {ECO:0000313|EMBL:CBL44578.1};; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma p
eryA; Erythronolide synthase, modules 3 and 4 (EC:2.3.1.94) rbh
Erythronolide synthase, modules 3 and 4 n=1 Tax=gamma proteobacterium HdN1 RepID=E1VID6_9GAMM rbh
BD02T64_scaffold_383_14
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40003..42108)
DNA (2106bp) protein (702aa)
Probable AMP-dependent synthetase and ligase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VID5_9GAMM rbh
AMP-dependent synthetase/ligase
Probable AMP-dependent synthetase and ligase {ECO:0000313|EMBL:CBL44577.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_383_15
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42385..43146)
DNA (762bp) protein (254aa)
Thioesterase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VID4_9GAMM
thioesterase
Thioesterase {ECO:0000313|EMBL:CBL44576.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_383_16
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43259..45637
DNA (2379bp) protein (793aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VID3_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL44575.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_383_17
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45790..47964
DNA (2175bp) protein (725aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-J06 RepID=UPI00037A8752
sensory response regulator with diguanylate cyclase domain Tax=RBG_16_Gamma2_65_34_curated
sensory response regulator with diguanylate cyclase domain
BD02T64_scaffold_383_18
unknown

Not on your lists

48098..48319
DNA (222bp) protein (74aa)

This feature has no annotations

BD02T64_scaffold_383_19
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48335..48586)
DNA (252bp) protein (84aa)
Hypothetical cytosolic protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LS45_SYNAS
cytoplasmic protein
Hypothetical cytosolic protein {ECO:0000313|EMBL:ABC76904.1}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus a
BD02T64_scaffold_383_20
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48586..49200)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI00038011B9
lytic transglycosylase
Lytic transglycosylase {ECO:0000313|EMBL:AFU97304.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCR
BD02T64_scaffold_383_21
Endozoicomonas numazuensis, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49200..51257)
DNA (2058bp) protein (686aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {EC
NAD-dependent DNA ligase (EC:6.5.1.2)
DNA ligase n=1 Tax=Marinobacter sp. EN3 RepID=U7HNZ0_9ALTE rbh
BD02T64_scaffold_383_22
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51402..52496)
DNA (1095bp) protein (365aa)
Cell division protein ZipA n=1 Tax=gamma proteobacterium HdN1 RepID=E1VP70_9GAMM rbh
zipA; cell division protein ZipA
Cell division protein ZipA {ECO:0000256|RuleBase:RU003612}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_383_23
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52702..56205)
DNA (3504bp) protein (1168aa)
Chromosome partition protein Smc n=1 Tax=gamma proteobacterium HdN1 RepID=E1VP69_9GAMM
smc; Chromosome segregation ATPase
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium
BD02T64_scaffold_383_24
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56502..57356
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJU2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL45084.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_383_25
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57408..57845)
DNA (438bp) protein (146aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DMT5_PSEMN rbh
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959};
cytochrome c-type biogenesis protein CcmE
BD02T64_scaffold_383_26
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57829..58047)
DNA (219bp) protein (73aa)
Heme exporter protein D {ECO:0000313|EMBL:EFQ64540.1}; TaxID=746360 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluore
BD02T64_scaffold_383_27
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58049..58810)
DNA (762bp) protein (254aa)
Heme exporter n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJT6_9GAMM rbh
ccmC; Heme exporter
Heme exporter {ECO:0000313|EMBL:CBL45078.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_383_28
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58857..59552)
DNA (696bp) protein (232aa)
Heme exporter protein B n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJT5_9GAMM
ccmB; Heme exporter protein B
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764, ECO:0000313|EMBL:CBL45077.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_383_29
Nitrincola lacisaponensis, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59552..60214)
DNA (663bp) protein (221aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; Ta
cytochrome C biogenesis protein CcmA n=1 Tax=Marinobacterium stanieri RepID=UPI0002559BA9
ccmA; cytochrome c biogenesis protein CcmA
BD02T64_scaffold_383_30
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60342..62315
DNA (1974bp) protein (658aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJT3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL45075.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
Displaying items 1-30 of 36 in total

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