ggKbase home page

BD02T64_scaffold_543

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_543_1
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..96
DNA (96bp) protein (32aa)
Membrane protein {ECO:0000313|EMBL:KJE47531.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas viridans.;"
BD02T64_scaffold_543_2
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112..774
DNA (663bp) protein (221aa)
TetR family transcriptional regulator n=1 Tax=Glaciecola polaris LMG 21857 RepID=K7AJG1_9ALTE
TetR family transcriptional regulator {ECO:0000313|EMBL:KJE47542.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thala
TetR family transcriptional regulator
BD02T64_scaffold_543_3
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1031..3097
DNA (2067bp) protein (689aa)
Endothelin-converting enzyme 1 {ECO:0000313|EMBL:KGJ87226.1}; EC=3.4.24.71 {ECO:0000313|EMBL:KGJ87226.1};; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Altero
pepO; metalloendopeptidase PepO (EC:3.4.24.-)
Metalloendopeptidase PepO n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486V2_COLP3
BD02T64_scaffold_543_4
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4118..4753
DNA (636bp) protein (212aa)
cobO2; cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
Cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:KGJ87220.1}; EC=2.5.1.17 {ECO:0000313|EMBL:KGJ87220.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwell
Cob(I)alamin adenosyltransferase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486V8_COLP3
BD02T64_scaffold_543_5
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4790..5161)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Aeromonas veronii Hm21 RepID=U1HAJ7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJE43859.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
hypothetical protein
BD02T64_scaffold_543_6
Shewanella sediminis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5165..7711)
DNA (2547bp) protein (849aa)
PPE-repeat protein n=1 Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8FS22_SHESH
PPE repeat-containing protein
PPE-repeat protein {ECO:0000313|EMBL:ABV35645.1}; Flags: Precursor;; TaxID=425104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewane
BD02T64_scaffold_543_7
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7872..8816)
DNA (945bp) protein (315aa)
MarR family transcriptional regulator n=1 Tax=Alteromonas macleodii (strain Balearic Sea AD45) RepID=K0ECJ1_ALTMB
MarR family transcriptional regulator {ECO:0000313|EMBL:KJE39860.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thala
MarR family transcriptional regulator
BD02T64_scaffold_543_8
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9179..12463)
DNA (3285bp) protein (1095aa)
AcrB/AcrD/AcrF family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VP1_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ87905.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
AcrB/AcrD/AcrF family protein
BD02T64_scaffold_543_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12466..13698)
DNA (1233bp) protein (411aa)
RND transporter n=1 Tax=Colwellia piezophila RepID=UPI0003794884
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KGJ91271.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwel
RND family efflux transporter MFP subunit
BD02T64_scaffold_543_10
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14093..14557
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Halomonas stevensii RepID=UPI000304E3E6 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJE40023.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
hypothetical protein
BD02T64_scaffold_543_11
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14593..15435
DNA (843bp) protein (281aa)
GntR family transcriptional regulator n=1 Tax=Colwellia piezophila RepID=UPI0003747F59
Uncharacterized protein {ECO:0000313|EMBL:KGJ91272.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_543_12
Shewanella woodyi, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16349..17239
DNA (891bp) protein (297aa)
Alpha/beta hydrolase fold n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KMR9_SHEWM
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ACA87447.1}; Flags: Precursor;; TaxID=392500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="
BD02T64_scaffold_543_13
Shewanella woodyi, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17519..18448
DNA (930bp) protein (310aa)
Lipase chaperone-like protein n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KMS0_SHEWM rbh
lipase chaperone-like protein
Lipase chaperone-like protein {ECO:0000313|EMBL:ACA87448.1}; TaxID=392500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella wood
BD02T64_scaffold_543_14
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18572..19132)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003664AFE
Uncharacterized protein {ECO:0000313|EMBL:KGJ89266.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
tellurite resistance protein
BD02T64_scaffold_543_15
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19220..20245)
DNA (1026bp) protein (342aa)
TonB-dependent receptor n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VN6_COLP3
TonB-dependent receptor plug {ECO:0000313|EMBL:KGJ95260.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="
TonB-dependent receptor
BD02T64_scaffold_543_16
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20245..21684)
DNA (1440bp) protein (480aa)
TonB-dependent receptor n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VN6_COLP3
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AAZ25495.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_543_17
unknown

Not on your lists

comp(21797..22066)
DNA (270bp) protein (90aa)

This feature has no annotations

BD02T64_scaffold_543_18
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22233..23147)
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47VN3_COLP3
Succinylglutamate desuccinylase/aspartoacylase {ECO:0000313|EMBL:KGJ91276.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="C
hypothetical protein
BD02T64_scaffold_543_19
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23927..25342
DNA (1416bp) protein (472aa)
UPI0003D3CD34 related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003D3CD34 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD21990.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
phage integrase family protein
BD02T64_scaffold_543_20
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25339..28752
DNA (3414bp) protein (1138aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IHF1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIF30153.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. C
BD02T64_scaffold_543_21
unknown

Not on your lists

28757..29518
DNA (762bp) protein (254aa)

This feature has no annotations

BD02T64_scaffold_543_22
unknown

Not on your lists

29520..30020
DNA (501bp) protein (167aa)

This feature has no annotations

BD02T64_scaffold_543_23
Halomonas meridiana, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30032..32053
DNA (2022bp) protein (674aa)
DNA helicase/exodeoxyribonuclease V subunit alpha (EC:3.1.11.5)
DNA helicase/exodeoxyribonuclease V, alpha subunit n=1 Tax=Shewanella sp. (strain ANA-3) RepID=A0KZC6_SHESA
Uncharacterized protein {ECO:0000313|EMBL:KJD18737.1}; TaxID=29570 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas meridiana.;
BD02T64_scaffold_543_24
unknown

Not on your lists

32378..32512
DNA (135bp) protein (45aa)

This feature has no annotations

BD02T64_scaffold_543_25
unknown

Not on your lists

32509..32652
DNA (144bp) protein (48aa)

This feature has no annotations

BD02T64_scaffold_543_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32658..33776
DNA (1119bp) protein (373aa)
Radical SAM domain protein n=6 Tax=Escherichia coli RepID=D8EMT9_ECOLX rbh
Putative radical SAM {ECO:0000313|EMBL:EGU96823.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
hypothetical protein
BD02T64_scaffold_543_27
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33803..34393
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YAT7_MESOW rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH89913.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium oppo
BD02T64_scaffold_543_28
Pseudoalteromonas sp. BSi20429, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34537..35916)
DNA (1380bp) protein (460aa)
Putative uncharacterized protein n=1 Tax=Pseudoalteromonas sp. BSi20429 RepID=G7F7Q5_9GAMM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:GAA69178.1}; TaxID=1097676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" sour
hypothetical protein
BD02T64_scaffold_543_29
Vibrio sinaloensis, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35916..38201)
DNA (2286bp) protein (762aa)
ATPase n=1 Tax=Vibrio sinaloensis DSM 21326 RepID=E8M6U3_9VIBR rbh
ATPase {ECO:0000313|EMBL:EGA70247.1}; TaxID=945550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sinaloensis DSM 21326.;"
ATPase
BD02T64_scaffold_543_30
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38266..39345)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Pseudoalteromonas ruthenica RepID=UPI0003495A06 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY90853.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
beta-lactamase-like protein
Displaying items 1-30 of 55 in total

View Taxonomy