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BD02T64_scaffold_544

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_544_1
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..115
DNA (114bp) protein (38aa)
Translation initiation factor IF-1 n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=IF1_COLP3
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
BD02T64_scaffold_544_2
Psychromonas sp. CNPT3, Psychromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(411..1490)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Psychromonas sp. CNPT3 RepID=M4UL59_9GAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH81180.1}; TaxID=314282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Psychromonadaceae; Psychromonas.;" source="Psychromonas sp.
BD02T64_scaffold_544_3
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1547..2704)
DNA (1158bp) protein (386aa)
Hydrolase of the alpha/beta superfamily n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SHJ8_HAHCH rbh
alpha/beta fold family hydrolase rbh
Hydrolase of the alpha/beta superfamily {ECO:0000313|EMBL:ABC29876.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella c
BD02T64_scaffold_544_4
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3116..5743)
DNA (2628bp) protein (876aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; A
Lipid A export ATP-binding/permease protein MsbA 2 n=2 Tax=Colwellia psychrerythraea RepID=MSBA2_COLP3
lipid ABC transporter ATP-binding/permease MsbA
BD02T64_scaffold_544_5
Alteromonas sp. SN2, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5754..6017)
DNA (264bp) protein (88aa)
Uncharacterized protein {ECO:0000313|EMBL:AEF05747.1}; TaxID=715451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas sp. (s
BD02T64_scaffold_544_6
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6672..7181)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000376C7A3
Uncharacterized protein {ECO:0000313|EMBL:KGJ92793.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_544_7
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7220..9286)
DNA (2067bp) protein (689aa)
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; Helicase/nuclease RecBCD sub
recD; exodeoxyribonuclease V subunit alpha (EC:3.1.11.5)
Exodeoxyribonuclease V, alpha subunit n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480P0_COLP3
BD02T64_scaffold_544_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9270..12923)
DNA (3654bp) protein (1218aa)
recB; exodeoxyribonuclease V subunit beta (EC:3.1.11.5)
RecBCD enzyme subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01485};; Exonuclease V subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; Helicase/nuclease RecBCD sub
Exodeoxyribonuclease V, beta subunit n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480N9_COLP3
BD02T64_scaffold_544_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12920..16537)
DNA (3618bp) protein (1206aa)
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD sub
recC; exodeoxyribonuclease V subunit gamma (EC:3.1.11.5)
Exodeoxyribonuclease V, gamma subunit n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480N8_COLP3
BD02T64_scaffold_544_10
Pseudoalteromonas tunicata, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16848..17351
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C5F7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR30789.1}; TaxID=87626 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoa
3-phosphoshikimate 1-carboxyvinyltransferase
BD02T64_scaffold_544_11
Aliiglaciecola lipolytica, Aliiglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17575..18795
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Catenovulum agarivorans RepID=UPI000372F5E4
Uncharacterized protein {ECO:0000313|EMBL:GAC12901.1}; TaxID=1127673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Aliiglaciecola.;" source="Aliiglaciecola
hypothetical protein
BD02T64_scaffold_544_12
Aliiglaciecola lipolytica, Aliiglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18910..19449
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Catenovulum agarivorans RepID=UPI00030E8B05 rbh
Polysaccharide export outer membrane protein {ECO:0000313|EMBL:GAC12900.1}; TaxID=1127673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Aliiglaciecola.;" s
polysaccharide export-related protein
BD02T64_scaffold_544_13
Aliiglaciecola lipolytica, Aliiglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19462..21714
DNA (2253bp) protein (751aa)
capsular exopolysaccharide family protein (EC:2.7.10.2)
hypothetical protein n=1 Tax=Catenovulum agarivorans RepID=UPI0002E500E1 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAC12899.1}; TaxID=1127673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Aliiglaciecola.;" source="Aliiglaciecola
BD02T64_scaffold_544_14
Paraglaciecola psychrophila, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22438..22809
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Glaciecola psychrophila 170 RepID=K6Z1E2_9ALTE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH43167.1}; TaxID=1129794 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
BD02T64_scaffold_544_15
Aliiglaciecola lipolytica, Aliiglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23321..24049
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Catenovulum agarivorans RepID=UPI0003181A90
Tyrosine-protein phosphatase ywqE {ECO:0000313|EMBL:GAC12898.1}; TaxID=1127673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Aliiglaciecola.;" source="Alii
phosphotransferase domain-containing protein
BD02T64_scaffold_544_16
Haemophilus paraphrohaemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24199..24495)
DNA (297bp) protein (99aa)
nucleotidyltransferase (EC:2.7.7.-)
Putative toxin-antitoxin system, toxin component n=1 Tax=Haemophilus paraphrohaemolyticus HK411 RepID=I2NEE8_9PAST
Putative toxin-antitoxin system, toxin component {ECO:0000313|EMBL:EIG24209.1}; TaxID=1095743 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" so
BD02T64_scaffold_544_17
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

Not on your lists

comp(24497..24913)
DNA (417bp) protein (139aa)
Nucleotidyltransferase substrate binding protein, HI0074 family n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JP77_9GAMM rbh
nucleotidyltransferase substrate binding protein Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
nucleotidyltransferase substrate binding protein
BD02T64_scaffold_544_18
unknown

Not on your lists

25903..26532
DNA (630bp) protein (210aa)

This feature has no annotations

BD02T64_scaffold_544_19
Aliiglaciecola lipolytica, Aliiglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26525..27952
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Glaciecola lipolytica E3 RepID=K6XMK2_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:GAC12896.1}; TaxID=1127673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Aliiglaciecola.;" source="Aliiglaciecola
O-antigen polymerase
BD02T64_scaffold_544_20
Vibrio scophthalmi, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27972..28238)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Vibrio scophthalmi LMG 19158 RepID=F9RIB3_9VIBR rbh
Uncharacterized protein {ECO:0000313|EMBL:EGU42445.1}; TaxID=870967 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio scophthalmi LMG 19158.;"
hypothetical protein
BD02T64_scaffold_544_21
Vibrio scophthalmi, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28195..28476)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Vibrio scophthalmi LMG 19158 RepID=F9RIB4_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:EGU42446.1}; TaxID=870967 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio scophthalmi LMG 19158.;"
hypothetical protein
BD02T64_scaffold_544_22
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28767..29093)
DNA (327bp) protein (109aa)
DNA polymerase, beta domain protein region id=2135193 bin=GWD2_Bacteroidetes_33_33 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152 rbh
DNA polymerase subunit beta Tax=GWD2_Bacteroidetes_33_33_curated
DNA polymerase subunit beta
BD02T64_scaffold_544_23
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29083..29505)
DNA (423bp) protein (141aa)
Nucleotidyltransferase substrate binding protein, HI0074 family n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAP7_GEOUR rbh
Nucleotidyltransferase {ECO:0000313|EMBL:KGO92074.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subs
nucleotidyltransferase substrate binding protein
BD02T64_scaffold_544_24
Endozoicomonas numazuensis, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29666..31024)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Psychromonas ingrahamii (strain 37) RepID=A1SZA6_PSYIN
ATPase AAA {ECO:0000313|EMBL:KEQ16914.1}; TaxID=1137799 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas numazuensis.;"
hypothetical protein
BD02T64_scaffold_544_25
unknown

Not on your lists

31525..32526
DNA (1002bp) protein (334aa)

This feature has no annotations

BD02T64_scaffold_544_26
Aliiglaciecola lipolytica, Aliiglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32566..33702
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Glaciecola lipolytica E3 RepID=K6YNJ3_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:GAC12895.1}; TaxID=1127673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Aliiglaciecola.;" source="Aliiglaciecola
hypothetical protein
BD02T64_scaffold_544_27
Pseudoalteromonas luteoviolacea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33710..35167)
DNA (1458bp) protein (486aa)
mannose-1-phosphate guanyltransferase n=1 Tax=Pseudoalteromonas sp. NJ631 RepID=UPI0002FEAC83 rbh
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:ESP95136.1}; TaxID=1353533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoaltero
mannose-1-phosphate guanylyltransferase rbh
BD02T64_scaffold_544_28
Aliiglaciecola lipolytica, Aliiglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35203..35658)
DNA (456bp) protein (152aa)
GDP-mannose mannosyl hydrolase n=1 Tax=Glaciecola lipolytica E3 RepID=K6YS14_9ALTE rbh
GDP-mannose mannosyl hydrolase {ECO:0000313|EMBL:GAC14100.1}; TaxID=1127673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Aliiglaciecola.;" source="Aliigla
GDP-mannose mannosyl hydrolase
BD02T64_scaffold_544_29
Paraglaciecola psychrophila, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35852..36811)
DNA (960bp) protein (320aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxI
GDP-L-fucose synthase n=1 Tax=Glaciecola psychrophila 170 RepID=K7AUI6_9ALTE rbh
NAD-dependent epimerase/dehydratase
BD02T64_scaffold_544_30
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36924..37310)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029A458B rbh
hypothetical protein Tax=GWB2_Bacteroidetes_41_8_curated
hypothetical protein
Displaying items 1-30 of 45 in total

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