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BD02T64_scaffold_699

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_699_1
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(452..2374)
DNA (1923bp) protein (641aa)
Exonuclease SbcC n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480G6_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ92878.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
sbcC; nuclease sbcCD subunit C
BD02T64_scaffold_699_2
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2371..3690)
DNA (1320bp) protein (440aa)
Exonuclease SbcD n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480G5_COLP3
sbcD; exonuclease SbcD
Exonuclease SbcD {ECO:0000313|EMBL:AAZ25973.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (str
BD02T64_scaffold_699_3
Alteromonas australica, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3791..4258
DNA (468bp) protein (156aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=589873 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Psychrobacter sp. G RepID=S4YTJ5_9GAMM
hypothetical protein
BD02T64_scaffold_699_4
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4281..6389)
DNA (2109bp) protein (703aa)
Sensory box/GGDEF/EAL domain protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483V3_COLP3
sensory box protein
Sensory box/GGDEF/EAL domain protein {ECO:0000313|EMBL:AAZ27022.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
BD02T64_scaffold_699_5
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(6483..9329)
DNA (2847bp) protein (949aa)
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
fdhF; formate dehydrogenase subunit alpha (fdhF-2) (EC:1.2.1.2)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI000380F5D7
BD02T64_scaffold_699_6
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9326..9526)
DNA (201bp) protein (67aa)
NADH dehydrogenase (Quinone) n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L7C6_HALH1
NADH dehydrogenase (quinone)
Tax=BJP_08E140C01_Flavobacteriales_35_8
BD02T64_scaffold_699_7
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(9490..11049)
DNA (1560bp) protein (520aa)
NADH dehydrogenase (quinone); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI000360D654
NADH dehydrogenase (quinone)
BD02T64_scaffold_699_8
Moritella sp. PE36, Moritella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11065..11949)
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000362F717
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=58051 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Moritellaceae; Moritella.;"
putative formate dehydrogenase
BD02T64_scaffold_699_9
Marinomonas sp. MED121, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12390..14054
DNA (1665bp) protein (555aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=314277 spe
Formate--tetrahydrofolate ligase n=1 Tax=Marinomonas sp. MED121 RepID=A3Y8X5_9GAMM
formyltetrahydrofolate synthetase
BD02T64_scaffold_699_10
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14157..16547)
DNA (2391bp) protein (797aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PI
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2)
phosphoenolpyruvate synthase n=1 Tax=Colwellia piezophila RepID=UPI00037BF52A
BD02T64_scaffold_699_11
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16690..17499
DNA (810bp) protein (270aa)
PEP synthetase regulatory protein n=1 Tax=Colwellia piezophila RepID=UPI00037B781B
Putative phosphoenolpyruvate synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062, ECO:0000256|SAAS:SAAS00213394}; Short=PEP synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062};; Sho
hypothetical protein
BD02T64_scaffold_699_12
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17658..18707
DNA (1050bp) protein (350aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR
aroH; phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47ZQ6_COLP3
BD02T64_scaffold_699_13
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18792..19262)
DNA (471bp) protein (157aa)
phosphotyrosine protein phosphatase (EC:3.1.3.48)
Phosphotyrosine protein phosphatase {ECO:0000313|EMBL:AAZ27653.1}; EC=3.1.3.48 {ECO:0000313|EMBL:AAZ27653.1};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Col
Phosphotyrosine protein phosphatase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47ZQ5_COLP3
BD02T64_scaffold_699_14
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19606..20763)
DNA (1158bp) protein (386aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47X45_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ24858.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_699_15
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20894..21310)
DNA (417bp) protein (139aa)
HxlR family transcriptional regulator n=2 Tax=Vibrio tubiashii RepID=F9T3F4_9VIBR rbh
HxlR family transcriptional regulator {ECO:0000313|EMBL:KJE42519.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thala
HxlR family transcriptional regulator
BD02T64_scaffold_699_16
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21417..22088
DNA (672bp) protein (224aa)
Glutathione S-transferase-like protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GKZ0_9GAMM
Glutathione S-transferase-like protein {ECO:0000313|EMBL:EPJ49745.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source
glutathione S-transferase
BD02T64_scaffold_699_17
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22410..22793
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000364CFB3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJE40486.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
BD02T64_scaffold_699_18
RBG_13_Chloroflexi_48_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(22889..23341)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI00037A46FE rbh
hypothetical protein Tax=RBG_13_Chloroflexi_48_10_curated
hypothetical protein
BD02T64_scaffold_699_19
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(23421..23918)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI00036B9DF6 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH63680.1}; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC
BD02T64_scaffold_699_20
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(23878..24882)
DNA (1005bp) protein (335aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7K939_CYAP7 rbh
alcohol dehydrogenase zinc-binding domain-containing protein
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ACK72808.1}; TaxID=65393 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp
BD02T64_scaffold_699_21
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24973..25425)
DNA (453bp) protein (151aa)
Transcriptional regulator n=1 Tax=Clostridium pasteurianum BC1 RepID=R4KII9_CLOPA rbh
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGK99440.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
BD02T64_scaffold_699_22
unknown

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25653..25832
DNA (180bp) protein (60aa)

This feature has no annotations

BD02T64_scaffold_699_23
unknown

Not on your lists

25893..26024
DNA (132bp) protein (44aa)

This feature has no annotations

BD02T64_scaffold_699_24
Pseudoalteromonas lipolytica, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26084..28666
DNA (2583bp) protein (861aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037E6100 rbh
Aminopeptidase {ECO:0000313|EMBL:EWH06523.1}; TaxID=1452721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromo
Peptidase M1 membrane alanine aminopeptidase
BD02T64_scaffold_699_25
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29058..29420
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Labrenzia RepID=U7FPM1_9RHOB
Protozoan/cyanobacterial globin family protein
Protozoan/cyanobacterial globin family protein {ECO:0000313|EMBL:CCQ73441.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;"
BD02T64_scaffold_699_26
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29408..30370
DNA (963bp) protein (321aa)
GGDEF/HAMP domain protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q488S8_COLP3
Diguanylate cyclase with integral membrane sensor {ECO:0000313|EMBL:KGJ94963.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source
GGDEF/HAMP domain-containing protein
BD02T64_scaffold_699_27
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30552..32048
DNA (1497bp) protein (499aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003730C79
Uncharacterized protein {ECO:0000313|EMBL:KGJ93364.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp.
hypothetical protein
BD02T64_scaffold_699_28
Hyphomonas johnsonii, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32084..32830
DNA (747bp) protein (249aa)
Methyltransferase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LZJ5_HALO1
Methyltransferase {ECO:0000313|EMBL:KCZ89413.1}; TaxID=1280950 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas johnsonii MHS-
methyltransferase
BD02T64_scaffold_699_29
Psychromonas sp. CNPT3, Psychromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33116..34177
DNA (1062bp) protein (354aa)
3-oxoacyl-(acyl carrier protein) synthase III (EC:2.3.1.41)
3-oxoacyl-(Acyl carrier protein) synthase III {ECO:0000313|EMBL:AGH81116.1}; EC=2.3.1.41 {ECO:0000313|EMBL:AGH81116.1};; TaxID=314282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromona
3-oxoacyl-(Acyl carrier protein) synthase III n=1 Tax=Psychromonas sp. CNPT3 RepID=M4U664_9GAMM
BD02T64_scaffold_699_30
Geitlerinema sp. PCC 7407, Geitlerinema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(34203..34625)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI0002E807A0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY66631.1}; Flags: Precursor;; TaxID=1173025 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Geitlerinema.;" source="Geitlerinema s
Displaying items 1-30 of 39 in total

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