ggKbase home page

BD02T64_scaffold_851

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_851_1
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(501..1286)
DNA (786bp) protein (262aa)
Oxidoreductase, 2OG-Fe(II) oxygenase family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486F0_COLP3 rbh
2OG-Fe(II) oxygenase
Oxidoreductase, 2OG-Fe(II) oxygenase family {ECO:0000313|EMBL:AAZ27973.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Col
BD02T64_scaffold_851_2
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1359..2690)
DNA (1332bp) protein (444aa)
aldehyde dehydrogenase (EC:1.2.1.-)
Aldehyde dehydrogenase (NAD) family protein {ECO:0000313|EMBL:AAZ26791.1}; EC=1.2.1.- {ECO:0000313|EMBL:AAZ26791.1};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadal
Aldehyde dehydrogenase (NAD) family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q486F1_COLP3 rbh
BD02T64_scaffold_851_3
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2801..3844)
DNA (1044bp) protein (348aa)
2-alkenal reductase {ECO:0000313|EMBL:KGJ94868.1}; EC=1.3.1.74 {ECO:0000313|EMBL:KGJ94868.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwe
NADP-dependent oxidoreductase n=1 Tax=Colwellia piezophila RepID=UPI000370D68D rbh
oxidoreductase, zinc-binding
BD02T64_scaffold_851_4
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3941..4633)
DNA (693bp) protein (231aa)
dimethylallyltransferase n=1 Tax=Colwellia piezophila RepID=UPI00036F594A rbh
ThiJ/PfpI domain-containing protein {ECO:0000313|EMBL:KGJ94870.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia ps
ThiJ/PfpI family protein
BD02T64_scaffold_851_5
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4810..5721
DNA (912bp) protein (304aa)
LysR family transcriptional regulator n=1 Tax=Glaciecola psychrophila 170 RepID=K7A797_9ALTE rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KGJ94871.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
LysR family transcriptional regulator
BD02T64_scaffold_851_6
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6144..7568)
DNA (1425bp) protein (475aa)
Aspartate ammonia-lyase {ECO:0000313|EMBL:KEA62486.1}; EC=4.3.1.1 {ECO:0000313|EMBL:KEA62486.1};; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadacea
Aspartate ammonia-lyase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BGK7_NEPCE
fumarate lyase
BD02T64_scaffold_851_7
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7722..8576)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Glaciecola chathamensis S18K6 RepID=K6XQK7_9ALTE rbh
GCN5-like N-acetyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EPC03422.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticarie
BD02T64_scaffold_851_8
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8629..10455)
DNA (1827bp) protein (609aa)
Glutathione import ATP-binding protein gsiA n=1 Tax=Glaciecola chathamensis S18K6 RepID=K6X9G9_9ALTE rbh
Oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein {ECO:0000313|EMBL:KHS44506.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomona
ABC transporter
BD02T64_scaffold_851_9
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10436..11263)
DNA (828bp) protein (276aa)
Peptide/nickel transport system permease protein n=1 Tax=Glaciecola chathamensis S18K6 RepID=K6XQL2_9ALTE rbh
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABD27378.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonad
BD02T64_scaffold_851_10
Marinomonas mediterranea, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11266..12222)
DNA (957bp) protein (319aa)
Glutathione transport system permease protein gsiC n=1 Tax=Glaciecola chathamensis S18K6 RepID=K6XVA1_9ALTE rbh
ABC transporter permease
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:ADZ91693.1}; TaxID=717774 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomona
BD02T64_scaffold_851_11
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12242..13810)
DNA (1569bp) protein (523aa)
Peptide/nickel transport system substrate-binding protein n=1 Tax=Glaciecola chathamensis S18K6 RepID=K6WIM0_9ALTE rbh
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:CCW17856.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sph
extracellular solute-binding protein
BD02T64_scaffold_851_12
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13857..15131)
DNA (1275bp) protein (425aa)
FAD dependent oxidoreductase n=1 Tax=Glaciecola chathamensis S18K6 RepID=K6YAK7_9ALTE rbh
FAD dependent oxidoreductase
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KGY55762.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia compl
BD02T64_scaffold_851_13
Marinomonas sp. MWYL1, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15140..15808)
DNA (669bp) protein (223aa)
2-haloacid dehalogenase n=1 Tax=Glaciecola chathamensis S18K6 RepID=K6X9H4_9ALTE rbh
haloacid dehalogenase
Haloacid dehalogenase, type II {ECO:0000313|EMBL:ABR71986.1}; TaxID=400668 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas sp. (strain MWY
BD02T64_scaffold_851_14
gamma proteobacterium IMCC3088, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16272..17648
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Glaciecola chathamensis S18K6 RepID=K6XQL7_9ALTE rbh
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:EGG28613.1}; TaxID=876044 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma pr
hypothetical protein
BD02T64_scaffold_851_15
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17648..18742
DNA (1095bp) protein (365aa)
Tartrate dehydrogenase (EC:1.1.1.93)
Tartrate dehydrogenase/decarboxylase/D-malate dehydrogenase n=1 Tax=Glaciecola chathamensis S18K6 RepID=K6XVA3_9ALTE rbh
Tartrate dehydrogenase {ECO:0000313|EMBL:EJL79830.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;
BD02T64_scaffold_851_16
Marinomonas sp. MWYL1, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18746..20215
DNA (1470bp) protein (490aa)
Succinate-semialdehyde dehydrogenase n=1 Tax=Glaciecola chathamensis S18K6 RepID=K6WIM5_9ALTE rbh
succinate-semialdehyde dehydrogenase
Succinic semialdehyde dehydrogenase {ECO:0000313|EMBL:ABR71977.1}; TaxID=400668 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas sp. (strai
BD02T64_scaffold_851_17
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20468..21178
DNA (711bp) protein (237aa)
Cytochrome b561 family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483U5_COLP3
cytochrome b561 family protein
Cytochrome b561 family protein {ECO:0000313|EMBL:AAZ25761.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychr
BD02T64_scaffold_851_18
Photobacterium profundum, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21267..22304)
DNA (1038bp) protein (346aa)
Hypothetical transposase n=1 Tax=Photobacterium profundum RepID=Q6LRG7_PHOPR
hypothetical protein
Hypothetical transposase {ECO:0000313|EMBL:CAG22713.1}; Uncharacterized protein {ECO:0000313|EMBL:CAG20109.1}; TaxID=74109 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibriona
BD02T64_scaffold_851_19
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22478..24424)
DNA (1947bp) protein (649aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-R
acs; acetyl-CoA synthetase (EC:6.2.1.1)
Acetyl-coenzyme A synthetase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47X57_COLP3
BD02T64_scaffold_851_20
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24551..25873)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Glaciecola chathamensis S18K6 RepID=K6YAK2_9ALTE rbh
D-amino acid oxidase {ECO:0000313|EMBL:KEC70061.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source=
Glycine/D-amino acid oxidase rbh
BD02T64_scaffold_851_21
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25917..27371)
DNA (1455bp) protein (485aa)
Putative aldehyde dehydrogenase n=1 Tax=Variovorax paradoxus B4 RepID=T1XKZ2_VARPD rbh
putative aldehyde dehydrogenase
Aldehyde dehydrogenase family protein {ECO:0000313|EMBL:KGC06456.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepa
BD02T64_scaffold_851_22
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27565..28746
DNA (1182bp) protein (394aa)
hipO1; hippurate hydrolase (EC:3.5.1.32)
amidohydrolase n=1 Tax=Halomonas sp. KM-1 RepID=UPI00028978B4 rbh
Amidohydrolase {ECO:0000313|EMBL:KFG92112.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovor
BD02T64_scaffold_851_23
Pseudoalteromonas atlantica, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28777..29709)
DNA (933bp) protein (311aa)
Glyoxylate/hydroxypyruvate reductase A n=1 Tax=Glaciecola chathamensis S18K6 RepID=K6XQK3_9ALTE rbh
D-isomer specific 2-hydroxyacid dehydrogenase
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein {ECO:0000313|EMBL:ABG39970.1}; TaxID=342610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromona
BD02T64_scaffold_851_24
gamma proteobacterium IMCC3088, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29715..30203)
DNA (489bp) protein (163aa)
Leucine-responsive regulatory protein n=1 Tax=Glaciecola chathamensis S18K6 RepID=K6X9G3_9ALTE rbh
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EGG28607.1}; TaxID=876044 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma proteobacterium IMCC30
AsnC family transcriptional regulator
BD02T64_scaffold_851_25
gamma proteobacterium IMCC3088, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30323..32455)
DNA (2133bp) protein (711aa)
Iron complex outermembrane recepter protein n=1 Tax=Glaciecola chathamensis S18K6 RepID=K6YAJ2_9ALTE rbh
Ferrichrome-iron receptor {ECO:0000313|EMBL:EGG28608.1}; TaxID=876044 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma proteobacterium IMCC3088.;"
TonB-dependent siderophore receptor
BD02T64_scaffold_851_26
unknown

Not on your lists

comp(32677..32793)
DNA (117bp) protein (39aa)

This feature has no annotations

BD02T64_scaffold_851_27
Paraglaciecola arctica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32793..33353)
DNA (561bp) protein (187aa)
Cytochrome c family protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6Z7V9_9ALTE
Cytochrome c family protein {ECO:0000313|EMBL:GAC19530.1}; TaxID=493475 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciec
cytochrome c family protein
BD02T64_scaffold_851_28
Pseudoalteromonas sp. BSi20311, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33390..33674)
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Pseudoalteromonas sp. BSi20311 RepID=G7EVQ3_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:GAA64976.1}; TaxID=383911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" sourc
hypothetical protein
BD02T64_scaffold_851_29
unknown

Not on your lists

33830..34009
DNA (180bp) protein (60aa)

This feature has no annotations

BD02T64_scaffold_851_30
gamma proteobacterium IMCC3088, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33966..34307
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Glaciecola chathamensis S18K6 RepID=K6XQM5_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:EGG28626.1}; TaxID=876044 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma proteobacterium IMCC3088.;"
hypothetical protein
Displaying items 1-30 of 37 in total

View Taxonomy