ggKbase home page

BD02T64_scaffold_920

Search features with annotation key words

Displaying 30 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_920_1
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..705
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BUQ2_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE13452.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophil
BD02T64_scaffold_920_2
unknown

Not on your lists

784..1140
DNA (357bp) protein (119aa)

This feature has no annotations

BD02T64_scaffold_920_3
unknown

Not on your lists

comp(2082..2519)
DNA (438bp) protein (146aa)

This feature has no annotations

BD02T64_scaffold_920_4
unknown

Not on your lists

2999..3139
DNA (141bp) protein (47aa)

This feature has no annotations

BD02T64_scaffold_920_5
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3278..4369)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZMU2_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ14827.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
alcohol dehydrogenase
BD02T64_scaffold_920_6
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4886..7117
DNA (2232bp) protein (744aa)
Isocitrate dehydrogenase {ECO:0000313|EMBL:AFU97817.1}; EC=1.1.1.42 {ECO:0000313|EMBL:AFU97817.1};; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia a
isocitrate dehydrogenase (EC:1.1.1.42)
Isocitrate dehydrogenase n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KV52_SIMAS
BD02T64_scaffold_920_7
Grimontia indica, Grimontia, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7222..7521
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Grimontia sp. AK16 RepID=R1IPJ5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EOD79372.1}; TaxID=1056512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grimontia.;" source="Grimontia indica.;"
hypothetical protein
BD02T64_scaffold_920_8
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7588..8292
DNA (705bp) protein (235aa)
response regulator n=1 Tax=Hahella ganghwensis RepID=UPI000371D059
Response regulator {ECO:0000313|EMBL:ESS73290.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus mo
response regulator
BD02T64_scaffold_920_9
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8455..9675)
DNA (1221bp) protein (407aa)
Aminotransferase {ECO:0000313|EMBL:KJS03968.1}; EC=2.6.1.2 {ECO:0000313|EMBL:KJS03968.1};; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium
aminotransferase (EC:2.6.1.2)
Aspartate aminotransferase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BMG7_NEPCE
BD02T64_scaffold_920_10
Leptospira vanthielii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

9815..10222
DNA (408bp) protein (136aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Leptospira vanthielii serovar Holland str. Waz Holland = ATCC 700522 RepID=N1W1R1_9LEPT
Protein-methionine-S-oxide reductase
BD02T64_scaffold_920_11
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10237..11067
DNA (831bp) protein (277aa)
Conserved hypothetical n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P542_AROAE
hypothetical protein
Conserved hypothetical {ECO:0000313|EMBL:CAI07570.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (s
BD02T64_scaffold_920_12
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

Not on your lists

11252..12778
DNA (1527bp) protein (509aa)
EstDL30 n=1 Tax=uncultured bacterium RepID=G1ARD1_9BACT
carboxylesterase Tax=RBG_13_Chloroflexi_46_14_curated
putative carboxylesterase
BD02T64_scaffold_920_13
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(12969..13742)
DNA (774bp) protein (258aa)
Crotonase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2J0C9_9BURK
enoyl-CoA hydratase/isomerase Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
enoyl-CoA hydratase/isomerase
BD02T64_scaffold_920_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13969..14727)
DNA (759bp) protein (253aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CX19_PSEUX
enoyl-CoA hydratase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AEA24650.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
BD02T64_scaffold_920_15
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15086..15568)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A375_METMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF99007.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas meth
BD02T64_scaffold_920_16
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15558..16754)
DNA (1197bp) protein (399aa)
Glycosyl transferase family 2 n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A376_METMM
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEF99008.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomona
BD02T64_scaffold_920_17
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16822..18756)
DNA (1935bp) protein (645aa)
Outer membrane polysaccharide N-deacetylase n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A0T1_PELCD rbh
hypothetical protein
Tax=BJP_IG2157_Desulfuromonadales_56_134
BD02T64_scaffold_920_18
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18756..21212)
DNA (2457bp) protein (819aa)
Tetratricopeptide TPR_2 repeat-containing protein n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A377_METMM rbh
hypothetical protein
Tax=BJP_IG2157_Desulfuromonadales_56_134
BD02T64_scaffold_920_19

Not on your lists

comp(21533..22006)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AAA300-D14 RepID=UPI0003753175
Uncharacterized protein {ECO:0000313|EMBL:KKO10489.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
protein of unknown function DUF1332
BD02T64_scaffold_920_20
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22003..22965)
DNA (963bp) protein (321aa)
tal; transaldolase B (EC:2.2.1.2)
Transaldolase {ECO:0000255|HAMAP-Rule:MF_00492}; EC=2.2.1.2 {ECO:0000255|HAMAP-Rule:MF_00492};; TaxID=377629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadales ge
transaldolase n=1 Tax=Gilvimarinus chinensis RepID=UPI0003626373
BD02T64_scaffold_920_21
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23023..24099)
DNA (1077bp) protein (359aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteoba
tRNA-dihydrouridine synthase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YT08_9GAMM
hypothetical protein
BD02T64_scaffold_920_22
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24343..25791
DNA (1449bp) protein (483aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AAA300-D14 RepID=UPI00035E447C
aldehyde dehydrogenase
BD02T64_scaffold_920_23
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25887..26309)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YH72_9GAMM
Acyl dehydratase {ECO:0000313|EMBL:ETX04062.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
dehydrogenase
BD02T64_scaffold_920_24
marine actinobacterium MedAcidi-G3, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26333..26851)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YH73_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KIE53758.1}; TaxID=1550402 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G3.;"
hypothetical protein
BD02T64_scaffold_920_25
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26902..28044)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUP0_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS63623.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivor
BD02T64_scaffold_920_26
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28041..28463)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07QP1_RHOP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ05743.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
BD02T64_scaffold_920_27
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28611..30320)
DNA (1710bp) protein (570aa)
Amidohydrolase 3 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWK5_PARL1
Uncharacterized protein {ECO:0000313|EMBL:ETW93583.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
amidohydrolase 3
BD02T64_scaffold_920_28
Alcanivorax sp. PN-3, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30675..31490
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HXJ7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERS14005.1}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp.
hypothetical protein
BD02T64_scaffold_920_29
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31607..37342)
DNA (5736bp) protein (1912aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CCE21754.1};; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methy
Putative signal transduction histidine kinase n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4STT2_META2
signal transduction histidine kinase
BD02T64_scaffold_920_30
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38092..38805)
DNA (714bp) protein (238aa)
DnaJ domain protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTE8_9GAMM rbh
DnaJ domain protein {ECO:0000313|EMBL:EAS47539.1}; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" source="gamma proteobacterium HTCC2207.;"
heat shock protein DnaJ-like protein
Displaying 30 items

View Taxonomy