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BD02T64_scaffold_2005

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2005_1

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1..588
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9EEB6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKL94765.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase IS66 family
BD02T64_scaffold_2005_2
Roseibacterium elongatum, Roseibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1118..1744)
DNA (627bp) protein (209aa)
Undecaprenyl-phosphate galactosephosphotransferase (EC:2.7.8.6)
Undecaprenyl-phosphate galactosephosphotransferase {ECO:0000313|EMBL:AHM03753.1}; EC=2.7.8.6 {ECO:0000313|EMBL:AHM03753.1};; TaxID=1294273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodo
Sugar transferase n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6ASK3_9RHOB
BD02T64_scaffold_2005_3
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1726..2592)
DNA (867bp) protein (289aa)
Rb145 n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6ASK2_9RHOB
hypothetical protein
Tax=BJP_08E140C01_Roseovarius_63_250
BD02T64_scaffold_2005_4
Roseobacter sp. GAI101, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2579..4000)
DNA (1422bp) protein (474aa)
algA; alginate biosynthesis protein AlgA (EC:5.3.1.8 2.7.7.22)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Roseobacter sp. GAI101 RepID=B7RIE9_9RHOB rbh
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:EEB83661.1}; TaxID=391589 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterac
BD02T64_scaffold_2005_5
Roseobacter sp. GAI101, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4055..5023)
DNA (969bp) protein (323aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxI
GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
GDP-L-fucose synthase n=1 Tax=Roseobacter sp. GAI101 RepID=B7RIF0_9RHOB rbh
BD02T64_scaffold_2005_6

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comp(5027..6151)
DNA (1125bp) protein (375aa)
GDP-mannose 4,6-dehydratase n=1 Tax=Roseobacter sp. GAI101 RepID=B7RIF1_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN53111.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
GDP-mannose 4,6-dehydratase
BD02T64_scaffold_2005_7
Roseibacterium elongatum, Roseibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6188..6943)
DNA (756bp) protein (252aa)
Glycosyl transferase family 2 n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F7M1_9RHIZ
glycosyl transferase, family 2
Glycosyl transferase, family 2 {ECO:0000313|EMBL:AHM03749.1}; TaxID=1294273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibacterium.;" source="Roseiba
BD02T64_scaffold_2005_8
Paenisporosarcina sp. HGH0030, Paenisporosarcina, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6940..8250)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Paenisporosarcina sp. HGH0030 RepID=S2XNJ8_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EPD53883.1}; TaxID=1078085 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Paenisporosarcina.;" source="Paenisporosarcina sp. HGH0030.;"
BD02T64_scaffold_2005_9
Acinetobacter indicus, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8247..9383)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. NIPH 236 RepID=N8R565_9GAMM rbh
glycosyltransferase
Uncharacterized protein {ECO:0000313|EMBL:KJV44730.1}; TaxID=756892 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter indic
BD02T64_scaffold_2005_10
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9380..10606)
DNA (1227bp) protein (409aa)
polysaccharide biosynthesis protein n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B5BD57 rbh
polysaccharide biosynthesis protein Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
polysaccharide biosynthesis protein
BD02T64_scaffold_2005_11

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comp(10675..11769)
DNA (1095bp) protein (365aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Glutamine--scyllo-inositol transaminase n=1 Tax=Thauera aminoaromatica S2 RepID=N6XTY8_9RHOO rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN75565.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BD02T64_scaffold_2005_12

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comp(11775..12347)
DNA (573bp) protein (191aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC:2.3.1.89)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00035DFCCA rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN75564.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BD02T64_scaffold_2005_13

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comp(12347..13291)
DNA (945bp) protein (315aa)
MviM protein n=1 Tax=gamma proteobacterium IMCC3088 RepID=F3L3R6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN75563.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
mviM; MviM protein
BD02T64_scaffold_2005_14

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comp(13303..14598)
DNA (1296bp) protein (432aa)
UDPglucose 6-dehydrogenase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N6E0_ERYLH rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN75561.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
udpglucose 6-dehydrogenase
BD02T64_scaffold_2005_15
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14920..15771)
DNA (852bp) protein (284aa)
Transposase n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SCU3_9RHOB
Transposase {ECO:0000313|EMBL:AKI01811.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
transposase
BD02T64_scaffold_2005_16

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comp(15780..16073)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FMG0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKO01773.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative transposase IS3/IS911
BD02T64_scaffold_2005_17
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16232..16888
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SDI5_9RHOB rbh
Integrase, catalytic region {ECO:0000313|EMBL:EDM71453.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp
putative transposase for insertion sequence element
BD02T64_scaffold_2005_18
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16975..17484
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z2S4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM30516.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononid
integrase catalytic subunit
BD02T64_scaffold_2005_19
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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17610..18317
DNA (708bp) protein (236aa)
Transposase n=2 Tax=Saccharopolyspora erythraea RepID=A4FJX3_SACEN
Integrase {ECO:0000313|EMBL:KJB90618.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 116
transposase
BD02T64_scaffold_2005_20

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19074..20255
DNA (1182bp) protein (394aa)
Plasmid partitioning protein ParA n=1 Tax=uncultured bacterium RepID=C6KU66_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKN51842.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
repA; RepA partitioning protein/ATPase, ParA type
BD02T64_scaffold_2005_21

Not on your lists

20245..21168
DNA (924bp) protein (308aa)
Plasmid partitioning protein ParB n=1 Tax=uncultured bacterium RepID=C6KU65_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKN51843.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
plasmid partitioning protein RepB-8
Displaying 21 items

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