ggKbase home page

BD02T64_scaffold_2022

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2022_1
Alteromonas macleodii, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..974)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Salinimonas chungwhensis RepID=UPI0003818251
Xaa-Pro dipeptidase family protein
Amidohydrolase {ECO:0000313|EMBL:AEB00172.1}; TaxID=314275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas macleodii (stra
BD02T64_scaffold_2022_2
unknown

Not on your lists

1201..1416
DNA (216bp) protein (72aa)

This feature has no annotations

BD02T64_scaffold_2022_3
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1413..3938
DNA (2526bp) protein (842aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3) Tax=RBG_16_Planctomycetes_64_12_curated
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QWY4_PIRSD
BD02T64_scaffold_2022_4
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

4023..4541
DNA (519bp) protein (173aa)
Probable marR-family transcription regulator n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZNS6_9PLAN rbh
MarR family transcriptional regulator
Probable marR-family transcription regulator {ECO:0000313|EMBL:EAQ81974.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" sour
BD02T64_scaffold_2022_5
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4538..5173
DNA (636bp) protein (212aa)
flavodoxin n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B370AC rbh
Flavodoxin/nitric oxide synthase
Flavodoxin/nitric oxide synthase {ECO:0000313|EMBL:CCB65992.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicr
BD02T64_scaffold_2022_6
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5279..5974
DNA (696bp) protein (232aa)
Pirin domain protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HDG4_ANADF rbh
pirin domain-containing protein
Pirin domain protein {ECO:0000313|EMBL:ABS26760.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" sour
BD02T64_scaffold_2022_7
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

6029..6397
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HL47_CYAP4
SnoaL-like polyketide cyclase Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein
BD02T64_scaffold_2022_8
unknown

Not on your lists

6488..6655
DNA (168bp) protein (56aa)

This feature has no annotations

BD02T64_scaffold_2022_9
unknown

Not on your lists

6921..7976
DNA (1056bp) protein (352aa)

This feature has no annotations

BD02T64_scaffold_2022_10
unknown

Not on your lists

7988..8329
DNA (342bp) protein (114aa)

This feature has no annotations

BD02T64_scaffold_2022_11
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

8348..8803
DNA (456bp) protein (152aa)
DoxX family protein Tax=RBG_13_Nitrospirae_39_12_curated
BD02T64_scaffold_2022_12
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

8766..9515
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IBZ4_PHYMF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM02782.1}; TaxID=1142394 species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensi
BD02T64_scaffold_2022_13

Not on your lists

comp(9540..10754)
DNA (1215bp) protein (405aa)
DNA polymerase IV n=1 Tax=uncultured planctomycete 3FN RepID=A9LGX4_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:KKM80122.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
dinP; DNA-damage-inducible protein P
BD02T64_scaffold_2022_14
unknown

Not on your lists

comp(10761..11420)
DNA (660bp) protein (220aa)

This feature has no annotations

BD02T64_scaffold_2022_15
unknown

Not on your lists

11848..12324
DNA (477bp) protein (159aa)

This feature has no annotations

BD02T64_scaffold_2022_16
unknown

Not on your lists

12352..12696
DNA (345bp) protein (115aa)

This feature has no annotations

BD02T64_scaffold_2022_17
unknown

Not on your lists

12712..12969
DNA (258bp) protein (86aa)

This feature has no annotations

BD02T64_scaffold_2022_18
unknown

Not on your lists

12935..13294
DNA (360bp) protein (120aa)

This feature has no annotations

BD02T64_scaffold_2022_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13307..13810
DNA (504bp) protein (168aa)
Halocyanin domain protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ82_9EURY rbh
Halocyanin domain protein {ECO:0000313|EMBL:EMA44789.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticu
hcp6; halocyanin-like protein
BD02T64_scaffold_2022_20
unknown

Not on your lists

13832..14041
DNA (210bp) protein (70aa)

This feature has no annotations

BD02T64_scaffold_2022_21
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

14001..14924
DNA (924bp) protein (308aa)
holA; putative DNA polymerase III delta subunit (EC:2.7.7.7)
Putative DNA polymerase III delta subunit {ECO:0000313|EMBL:BAM04807.1}; EC=2.7.7.7 {ECO:0000313|EMBL:BAM04807.1};; TaxID=1142394 species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phy
Putative DNA polymerase III delta subunit n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IHR9_PHYMF rbh
BD02T64_scaffold_2022_22
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

15033..16388
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IHR8_PHYMF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM04806.1}; TaxID=1142394 species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensi
BD02T64_scaffold_2022_23
RBG_13_Planctomycetes_44_8b_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

16791..17408
DNA (618bp) protein (206aa)
recombination protein RecR; K06187 recombination protein RecR Tax=RBG_13_Planctomycetes_44_8b_curated
Recombination protein RecR id=3954801 bin=GWF2_Planctomycetes_42_9 species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes rbh
recR; recombinant protein RecR
BD02T64_scaffold_2022_24
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

17530..19080
DNA (1551bp) protein (517aa)
RNA polymerase sigma-54 factor n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0ID50_PHYMF rbh
rpoN; RNA polymerase sigma-54 factor
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:BAM03188.1}; TaxID=1142394 species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mi
BD02T64_scaffold_2022_25
unknown

Not on your lists

19188..19667
DNA (480bp) protein (160aa)

This feature has no annotations

BD02T64_scaffold_2022_26
unknown

Not on your lists

19702..19962
DNA (261bp) protein (87aa)

This feature has no annotations

BD02T64_scaffold_2022_27
unknown

Not on your lists

20035..20811
DNA (777bp) protein (259aa)

This feature has no annotations

BD02T64_scaffold_2022_28
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

20808..21167
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IED2_PHYMF
prepilin-type N-terminal cleavage/methylation domain Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
hypothetical protein
Displaying 28 items

View Taxonomy