ggKbase home page

BD02T64_scaffold_2024

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2024_1
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1103)
DNA (1101bp) protein (367aa)
Nitrate reductase NarB {ECO:0000313|EMBL:ESS69816.1}; EC=1.7.99.4 {ECO:0000313|EMBL:ESS69816.1};; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcacea
nitrite reductase n=1 Tax=Methylosarcina fibrata RepID=UPI000377F981
Assimilatory nitrate reductase
BD02T64_scaffold_2024_2
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1231..2139)
DNA (909bp) protein (303aa)
Isomerase n=1 Tax=Cycloclasticus sp. PY97M RepID=S2V0N9_9GAMM
isomerase
Putative epimerase, PhzC/PhzF-like protein {ECO:0000313|EMBL:AGS40088.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" so
BD02T64_scaffold_2024_3
Thalassolituus oleivorans, Thalassolituus, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2155..2538)
DNA (384bp) protein (128aa)
Nitrite reductase (NAD(P)H), small subunit n=1 Tax=Thalassolituus oleivorans MIL-1 RepID=M5DQU5_9GAMM
nitrite reductase (NAD(P)H), small subunit
Nitrite reductase (NAD(P)H), small subunit {ECO:0000313|EMBL:CCU71873.1}; TaxID=1298593 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Thalassolituus.;" source="Thalassolit
BD02T64_scaffold_2024_4
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2535..5063)
DNA (2529bp) protein (843aa)
Nitrate reductase electron transfer subunit n=1 Tax=Cycloclasticus sp. (strain P1) RepID=K0C0R0_CYCSP
Nitrate reductase electron transfer subunit {ECO:0000313|EMBL:AFT66849.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" so
nitrate reductase electron transfer subunit
BD02T64_scaffold_2024_5
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

5680..6303
DNA (624bp) protein (208aa)
carbonate dehydratase (EC:4.2.1.1); K01673 carbonic anhydrase [EC:4.2.1.1] Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
carbonate dehydratase (EC:4.2.1.1)
Carbonic anhydrase id=4745784 bin=GWC2_Ignavibacteria_38_9 species=Marinomonas sp. MED121 genus=Marinomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
BD02T64_scaffold_2024_6
Pseudomonas tuomuerensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6527..7741
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000371A822
Uncharacterized protein {ECO:0000313|EMBL:KHO63707.1}; TaxID=400095 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas tuomue
RND family efflux transporter MFP subunit
BD02T64_scaffold_2024_7
Serpens flexibilis, Serpens, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7745..10936
DNA (3192bp) protein (1064aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KLP1_SOLCM
Uncharacterized protein {ECO:0000313|EMBL:KHL68230.1}; TaxID=706570 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Serpens.;" source="Serpens flexibilis.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
BD02T64_scaffold_2024_8
Serpens flexibilis, Serpens, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10937..12376
DNA (1440bp) protein (480aa)
Efflux transporter, outer membrane factor lipoprotein, NodT family n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KLP0_SOLCM
Uncharacterized protein {ECO:0000313|EMBL:KHL68229.1}; TaxID=706570 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Serpens.;" source="Serpens flexibilis.;"
NodT family efflux transporter outer membrane lipoprotein
BD02T64_scaffold_2024_9
Alcanivorax sp. P2S70, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12437..12757)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Alcanivorax sp. P2S70 RepID=U7G158_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:ERP91559.1}; TaxID=1397527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp.
Ion transport, K+ channel
BD02T64_scaffold_2024_10
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12939..14165)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YED4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJE42730.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
hypothetical protein
BD02T64_scaffold_2024_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14510..15520)
DNA (1011bp) protein (337aa)
Lipase chaperone n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XW83_SORCE rbh
hypothetical protein
Lipase chaperone {ECO:0000256|HAMAP-Rule:MF_00790}; Lipase activator protein {ECO:0000256|HAMAP-Rule:MF_00790}; Lipase foldase {ECO:0000256|HAMAP-Rule:MF_00790}; Lipase helper protein {ECO:0000256|HAM
BD02T64_scaffold_2024_12
Pseudomonas taeanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15523..16524)
DNA (1002bp) protein (334aa)
Lipase n=1 Tax=Pseudomonas stutzeri RepID=R4RRT6_PSEST
Lactonizing lipase {ECO:0000313|EMBL:KFX68972.1}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taeanensis
lactonizing lipase
BD02T64_scaffold_2024_13
Bacillus bataviensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16923..18218
DNA (1296bp) protein (432aa)
Acetyl-CoA hydrolase/transferase n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6C753_9BACI rbh
Acetyl-CoA hydrolase/transferase {ECO:0000313|EMBL:EKN66970.1}; TaxID=1117379 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus bataviensis LMG 21833.;"
acetyl-CoA hydrolase/transferase
BD02T64_scaffold_2024_14
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18392..19486
DNA (1095bp) protein (365aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW98531.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
TgaE id=4143218 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alkanal monooxygenase
BD02T64_scaffold_2024_15
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

19705..20802
DNA (1098bp) protein (366aa)
alkanal monooxygenase id=14627403 bin=bin7_NC10_sister species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
alkanal monooxygenase Tax=CSP1_6_Rokubacteria
alkanal monooxygenase
BD02T64_scaffold_2024_16
Pseudomonas oryzihabitans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21038..21412
DNA (375bp) protein (125aa)
CheC, inhibitor of MCP methylation n=1 Tax=Pseudomonas psychrotolerans L19 RepID=H0J6Q9_9PSED
Chemotaxis protein CheC {ECO:0000313|EMBL:KIZ48530.1}; TaxID=47885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas oryziha
response regulator receiver
BD02T64_scaffold_2024_17
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21402..22016
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000368F6DD
Putative CheC, inhibitor of MCP methylation {ECO:0000313|EMBL:EGK73426.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" sour
chemotaxis protein CheC
BD02T64_scaffold_2024_18
unknown

Not on your lists

22017..22145
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 18 items

View Taxonomy