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BD02T64_scaffold_2031

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2031_1
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1..2883
DNA (2883bp) protein (961aa)
Protein translocase subunit SecA n=1 Tax=Polaribacter irgensii 23-P RepID=A4C1U7_9FLAO
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae;
secA; preprotein translocase SecA subunit
BD02T64_scaffold_2031_2
unknown

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2862..3095
DNA (234bp) protein (78aa)

This feature has no annotations

BD02T64_scaffold_2031_3
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3161..4165)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U2W9_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAQ41198.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. MED1
BD02T64_scaffold_2031_4
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4168..4776)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U2X8_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAQ41197.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. MED1
BD02T64_scaffold_2031_5
Flavobacteriales bacterium ALC-1, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4745..5227)
DNA (483bp) protein (161aa)
RNA polymerase sigma-70 factor n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UPG4_9FLAO
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EDP69751.1}; TaxID=391603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium ALC-1.;"
RNA polymerase sigma-70 factor
BD02T64_scaffold_2031_6
Tamlana sedimentorum, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5569..6123)
DNA (555bp) protein (185aa)
HNH homing endonuclease n=1 Tax=Psychroflexus torquis (strain ATCC 700755 / ACAM 623) RepID=K4IC71_PSYTT
HNH homing endonuclease
HNH homing endonuclease {ECO:0000313|EMBL:KJD36712.1}; TaxID=1435349 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tamlana.;" source="Tamlana sedimentorum.;"
BD02T64_scaffold_2031_7
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6180..6893)
DNA (714bp) protein (238aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
folE1; GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase I n=1 Tax=Polaribacter franzmannii RepID=UPI0003677789
BD02T64_scaffold_2031_8
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(6916..8280)
DNA (1365bp) protein (455aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Polaribacter irgensii 23-P RepID=A4C1U9_9FLAO
BD02T64_scaffold_2031_9
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8388..9329)
DNA (942bp) protein (314aa)
ribonuclease BN n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI00037F7818 rbh
Ribonuclease BN {ECO:0000313|EMBL:KGL60722.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_33_49.
ribonuclease BN-like family protein
BD02T64_scaffold_2031_10
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9330..9902)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U2Y1_9FLAO
Protein McbG {ECO:0000313|EMBL:KGL63785.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_85.;"
hypothetical protein
BD02T64_scaffold_2031_11
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10010..10867)
DNA (858bp) protein (286aa)
Quinolinate phosphoribosyltransferase {ECO:0000313|EMBL:KGL63787.1}; EC=2.4.2.19 {ECO:0000313|EMBL:KGL63787.1};; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavo
nadC; nicotinate-nucleotide diphosphorylase (carboxylating) (EC:2.4.2.19)
Quinolinate phosphoribosyl transferase n=1 Tax=Polaribacter filamentus RepID=Q6W749_9FLAO
BD02T64_scaffold_2031_12
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11041..11514
DNA (474bp) protein (158aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP
50S rRNA methyltransferase n=1 Tax=Polaribacter franzmannii RepID=UPI00036E0EB5
hypothetical protein
BD02T64_scaffold_2031_13
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11519..12304)
DNA (786bp) protein (262aa)
Uncharacterized protein {ECO:0000313|EMBL:EZH71793.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;
Putative transcriptional regulator id=2033494 bin=GWE2_Bacteroidetes_32_14 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
putative transcriptional regulator
BD02T64_scaffold_2031_14
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


12507..13085
DNA (579bp) protein (193aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard p
Non-canonical purine NTP pyrophosphatase n=1 Tax=Polaribacter sp. MED152 RepID=A2U2Y6_9FLAO
Ham1 family protein
BD02T64_scaffold_2031_15
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13087..14118
DNA (1032bp) protein (344aa)
Iron transport system permease n=1 Tax=Polaribacter sp. MED152 RepID=A2U2Y5_9FLAO
Iron ABC transporter {ECO:0000313|EMBL:KGL63790.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_8
iron transport system permease
BD02T64_scaffold_2031_16
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14199..14921
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI00035F2D93
Iron(III) ABC transporter, ATP-binding protein {ECO:0000313|EMBL:KGL60715.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" sourc
ABC-type transporter
BD02T64_scaffold_2031_17
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14989..16047
DNA (1059bp) protein (353aa)
Peptidase family M28 n=1 Tax=Polaribacter sp. MED152 RepID=A2U2Y3_9FLAO
peptidase family M28 Tax=CG_Flavo_02
peptidase family M28
BD02T64_scaffold_2031_18
unknown

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16146..16571
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Mesoflavibacter zeaxanthinifaciens RepID=UPI000255B59E rbh
BD02T64_scaffold_2031_19
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16693..17697)
DNA (1005bp) protein (335aa)
DNA polymerase III subunit delta {ECO:0000313|EMBL:KGL63877.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KGL63877.1};; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacter
DNA polymerase III delta subunit (EC:2.7.7.7)
DNA polymerase III subunit delta n=1 Tax=Polaribacter franzmannii RepID=UPI0003736489
BD02T64_scaffold_2031_20
Polaribacter irgensii, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17715..18158
DNA (444bp) protein (148aa)
restriction endonuclease subunit R n=1 Tax=Polaribacter franzmannii RepID=UPI000368302A
Uncharacterized protein {ECO:0000313|EMBL:EAR12820.1}; TaxID=313594 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter irgensii
hypothetical protein
BD02T64_scaffold_2031_21
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18216..19214
DNA (999bp) protein (333aa)
Glycosyltransferase, GT2 family {ECO:0000313|EMBL:KGL60669.1}; EC=2.4.1.- {ECO:0000313|EMBL:KGL60669.1};; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteri
glycosyl transferase family 2 n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI0003654787
glycosyl transferase family 2
BD02T64_scaffold_2031_22
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19241..19861)
DNA (621bp) protein (207aa)
YrdC protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U2Y8_9FLAO
YrdC protein
YrdC protein {ECO:0000313|EMBL:EAQ41180.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. MED152.;"
BD02T64_scaffold_2031_23
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19951..20646)
DNA (696bp) protein (232aa)
transcriptional regulator n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI000382A585
two-component system response regulator
Two-component system response regulator {ECO:0000313|EMBL:EAQ41179.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polar
BD02T64_scaffold_2031_24
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20666..21064)
DNA (399bp) protein (133aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Pol
two-component system sensor histidine kinase (EC:2.7.13.3)
histidine kinase n=1 Tax=Polaribacter franzmannii RepID=UPI000367564B
BD02T64_scaffold_2031_25
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21073..22167)
DNA (1095bp) protein (365aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Pol
two-component system sensor histidine kinase (EC:2.7.13.3)
hypothetical protein n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI0003629B53
BD02T64_scaffold_2031_26
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22271..22867)
DNA (597bp) protein (199aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1336803 species="Bacteria; B
coaE; dephospho-CoA kinase (EC:2.7.1.24)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI000370E40B
BD02T64_scaffold_2031_27
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22867..23808)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI00037B19D7
Uncharacterized protein {ECO:0000313|EMBL:KGL63884.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel
hypothetical protein
BD02T64_scaffold_2031_28
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23927..24238)
DNA (312bp) protein (104aa)
Preprotein translocase subunit n=1 Tax=Polaribacter sp. MED152 RepID=A2U2Z2_9FLAO
yajC; preprotein translocase subunit
Preprotein translocase subunit YajC {ECO:0000313|EMBL:KGL60663.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polariba
BD02T64_scaffold_2031_29
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24253..24720)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI0003785947
protein of unknown function (DUF1573)
Uncharacterized protein {ECO:0000313|EMBL:EAQ41174.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. MED1
BD02T64_scaffold_2031_30
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24750..25688)
DNA (939bp) protein (313aa)
NusB family protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U300_9FLAO
nusB; NusB family protein
N utilization substance protein B homolog {ECO:0000256|SAAS:SAAS00057003}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="P
Displaying 30 items

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