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BD02T64_scaffold_2097

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2097_1
unknown

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comp(1..81)
DNA (81bp) protein (27aa)

This feature has no annotations

BD02T64_scaffold_2097_2
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(295..1929)
DNA (1635bp) protein (545aa)
RNA polymerase sigma-54 factor n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHC2_9GAMM
rpoN; DNA-directed RNA polymerase specialized sigma subunit
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_2097_3
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2284..3009)
DNA (726bp) protein (242aa)
Putative leucine/isoleucine/valine transport system, ATP-binding protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHC3_9GAMM
livF; leucine/isoleucine/valine transport system, ATP-binding protein
Putative leucine/isoleucine/valine transport system, ATP-binding protein {ECO:0000313|EMBL:CBL44215.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacter
BD02T64_scaffold_2097_4
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2963..3685)
DNA (723bp) protein (241aa)
OstA-like protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHC4_9GAMM
OstA-like protein
Lipopolysaccharide export system protein LptA {ECO:0000256|HAMAP-Rule:MF_01914}; Flags: Precursor;; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium
BD02T64_scaffold_2097_5
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3669..4238)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHC5_9GAMM
hypothetical protein
Lipopolysaccharide export system protein LptC {ECO:0000256|HAMAP-Rule:MF_01915}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_2097_6
Marinobacter sp. AK21, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4243..4773)
DNA (531bp) protein (177aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=1 Tax=Pseudomonas thermotolerans RepID=UPI00037CEC3C
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase {ECO:0000313|EMBL:KEF31593.1}; TaxID=1137280 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacte
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
BD02T64_scaffold_2097_7
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4773..5747)
DNA (975bp) protein (325aa)
Arabinose 5-phosphate isomerase {ECO:0000256|PIRNR:PIRNR004692}; Short=API {ECO:0000256|PIRNR:PIRNR004692};; EC=5.3.1.13 {ECO:0000256|PIRNR:PIRNR004692};; TaxID=83406 species="Bacteria; Proteobacteria
Arabinose 5-phosphate isomerase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHC6_9GAMM
hypothetical protein
BD02T64_scaffold_2097_8
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5801..6748)
DNA (948bp) protein (316aa)
Ca2+/Na+ antiporter n=1 Tax=Neptuniibacter caesariensis RepID=Q2BKN1_NEPCE
Ca2+/Na+ antiporter {ECO:0000313|EMBL:EAR61066.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter caesariensis.;"
sodium:calcium antiporter
BD02T64_scaffold_2097_9
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7094..7936
DNA (843bp) protein (281aa)
Toluene tolerance ABC efflux transporter, ATP-binding protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHC7_9GAMM
Toluene tolerance ABC efflux transporter ATP-binding protein
Toluene tolerance ABC efflux transporter, ATP-binding protein {ECO:0000313|EMBL:CBL44219.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_2097_10
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7937..8722
DNA (786bp) protein (262aa)
Toluene tolerance ABC efflux transporter, permease n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHC8_9GAMM
Toluene tolerance ABC efflux transporter permease
Toluene tolerance ABC efflux transporter, permease {ECO:0000313|EMBL:CBL44220.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_2097_11
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8764..9183
DNA (420bp) protein (140aa)
Toluene tolerance ABC transporter, periplasmic substrate-binding protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHC9_9GAMM
toluene tolerance ABC transporter periplasmic substrate-binding protein
Toluene tolerance ABC transporter, periplasmic substrate-binding protein {ECO:0000313|EMBL:CBL44221.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacter
BD02T64_scaffold_2097_12
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9183..9503
DNA (321bp) protein (107aa)
STAS domain protein n=3 Tax=Pseudomonas syringae group RepID=Q87WV0_PSESM
anti-sigma factor antagonist
Anti-sigma factor antagonist {ECO:0000313|EMBL:KIL06234.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stut
BD02T64_scaffold_2097_13
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9657..9914
DNA (258bp) protein (86aa)
BolA-like protein n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21FV1_SACD2 rbh
BolA-like protein
BolA-like protein {ECO:0000313|EMBL:ABD82428.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharophagus degrad
BD02T64_scaffold_2097_14
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9974..11236
DNA (1263bp) protein (421aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WSA5_PSEDE
BD02T64_scaffold_2097_15
Alcanivorax jadensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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11269..11928
DNA (660bp) protein (220aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Pseudomonas fuscovaginae RepID=UPI000288AB76
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; E
BD02T64_scaffold_2097_16

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11953..13254
DNA (1302bp) protein (434aa)
histidinol dehydrogenase (EC:1.1.1.23)
histidinol dehydrogenase n=1 Tax=Pseudomonas caeni RepID=UPI0003B53AB6
Uncharacterized protein {ECO:0000313|EMBL:KKN95400.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BD02T64_scaffold_2097_17
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13283..14491)
DNA (1209bp) protein (403aa)
HtrA-like protease AlgW n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHD6_9GAMM
algW; HtrA-like protease AlgW
HtrA-like protease AlgW {ECO:0000313|EMBL:CBL44228.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_2097_18
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14556..15314
DNA (759bp) protein (253aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=83406 species="Bacteria;
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHD7_9GAMM rbh
hypothetical protein
BD02T64_scaffold_2097_19
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15424..16737
DNA (1314bp) protein (438aa)
sat; sulfate adenylyltransferase (EC:2.7.7.4)
Sulfate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00066, ECO:0000313|EMBL:CBL44230.1}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00066, ECO:0000313|EMBL:CBL44230.1};; ATP-sulfurylase {ECO:0000256|HAM
Sulfate adenylyltransferase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHD8_9GAMM
BD02T64_scaffold_2097_20
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16886..17341)
DNA (456bp) protein (152aa)
Heat shock protein, Hsp20 family n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHD9_9GAMM
Heat shock protein, Hsp20 family
Heat shock protein, Hsp20 family {ECO:0000313|EMBL:CBL44231.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_2097_21
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17554..18045)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHE0_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL44232.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_2097_22
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18325..18993
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHE1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL44233.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
BD02T64_scaffold_2097_23
Bermanella marisrubri, Bermanella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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19076..20191
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N072_9GAMM
Cell division protein ZapE {ECO:0000256|HAMAP-Rule:MF_01919}; Z ring-associated protein ZapE {ECO:0000256|HAMAP-Rule:MF_01919}; TaxID=207949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oce
hypothetical protein
Displaying 23 items

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