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BD02T64_scaffold_2211

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2211_1
Vibrionales bacterium SWAT-3, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1453
DNA (1452bp) protein (484aa)
methyl-accepting chemotaxis protein n=1 Tax=Vibrio splendidus RepID=UPI000368287F
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EDK30360.1}; TaxID=391574 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; unclassified Vibrionales.;" source="Vibrionales bac
Methyl-accepting chemotaxis protein
BD02T64_scaffold_2211_2
Pseudoalteromonas piscicida, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1807..3000
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003621D61 rbh
Beta-lactamase {ECO:0000313|EMBL:KJY86288.1}; TaxID=43662 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromona
beta-lactamase
BD02T64_scaffold_2211_3
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3132..3602)
DNA (471bp) protein (157aa)
Transcriptional regulator, AsnC family n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LRE1_RUEPO
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:KGJ96955.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
transcriptional regulator, AsnC family
BD02T64_scaffold_2211_4
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3704..4786
DNA (1083bp) protein (361aa)
Diaminopropionate ammonia-lyase n=1 Tax=Ruegeria sp. R11 RepID=B7QZ96_9RHOB
Diaminopropionate ammonia-lyase {ECO:0000313|EMBL:KJE47308.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomon
hypothetical protein
BD02T64_scaffold_2211_5
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4783..5106
DNA (324bp) protein (108aa)
Oxidoreductase, FAD-binding/iron-sulfur cluster binding protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483K3_COLP3
oxidoreductase, FAD-binding/iron-sulfur cluster binding protein
Oxidoreductase, FAD-binding/iron-sulfur cluster binding protein {ECO:0000313|EMBL:AAZ27272.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colw
BD02T64_scaffold_2211_6
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5083..5589)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GRA2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPJ49947.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
hypothetical protein
BD02T64_scaffold_2211_7
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5672..6334)
DNA (663bp) protein (221aa)
Putative TetR-family transcriptional regulator n=1 Tax=Osedax symbiont Rs2 RepID=S6GL72_9GAMM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KGJ90940.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
TetR family transcriptional regulator
BD02T64_scaffold_2211_8
Pseudoalteromonas luteoviolacea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6751..7632
DNA (882bp) protein (294aa)
Acetyltransferase n=1 Tax=Pseudoalteromonas luteoviolacea 2ta16 RepID=V4HJW5_9GAMM rbh
Acetyltransferase {ECO:0000313|EMBL:ESP91110.1}; TaxID=1353533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalter
transferase
BD02T64_scaffold_2211_9
Pseudoalteromonas luteoviolacea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7735..8580
DNA (846bp) protein (282aa)
AraC-type DNA-binding domain-containing protein n=1 Tax=Pseudoalteromonas luteoviolacea 2ta16 RepID=V4H0Y5_9GAMM rbh
AraC-type DNA-binding domain-containing protein {ECO:0000313|EMBL:ESP91111.1}; TaxID=1353533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalte
AraC family transcriptional regulator
BD02T64_scaffold_2211_10
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8794..9024)
DNA (231bp) protein (77aa)
glutaredoxin n=1 Tax=Colwellia piezophila RepID=UPI00037470F4 rbh
Glutaredoxin {ECO:0000313|EMBL:KGJ90385.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (Vibrio p
glutaredoxin family protein
BD02T64_scaffold_2211_11
Vibrio neptunius, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9493..10416
DNA (924bp) protein (308aa)
Periplasmic binding protein/LacI transcriptional regulator n=2 Tax=Vibrio tubiashii RepID=I1D9S3_9VIBR rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:KJY88190.1}; TaxID=170651 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio neptunius.
LacI family transcriptional regulator
BD02T64_scaffold_2211_12
unknown

Not on your lists

comp(11355..11714)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Rheinheimera perlucida RepID=UPI00037F8A71 rbh
BD02T64_scaffold_2211_13
unknown

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comp(11741..12109)
DNA (369bp) protein (123aa)

This feature has no annotations

BD02T64_scaffold_2211_14
RBG_16_Bdellovibrionales_40_8_curated, Bdellovibrionales, Bdellovibrio, Bacteria

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comp(12237..13028)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037E6FAE rbh
hypothetical protein Tax=RBG_16_Bdellovibrionales_40_8_curated
hypothetical protein
BD02T64_scaffold_2211_15
unknown

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comp(13052..13297)
DNA (246bp) protein (82aa)

This feature has no annotations

BD02T64_scaffold_2211_16
unknown

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comp(13435..13761)
DNA (327bp) protein (109aa)

This feature has no annotations

BD02T64_scaffold_2211_17
unknown

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comp(13863..14324)
DNA (462bp) protein (154aa)

This feature has no annotations

BD02T64_scaffold_2211_18
unknown

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comp(14284..14652)
DNA (369bp) protein (123aa)

This feature has no annotations

BD02T64_scaffold_2211_19
Shewanella sediminis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14714..14977)
DNA (264bp) protein (88aa)
Acyl carrier protein n=1 Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8FW47_SHESH
hypothetical protein
Acyl carrier protein {ECO:0000256|RuleBase:RU003545}; TaxID=425104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sediminis (
BD02T64_scaffold_2211_20
Pseudoalteromonas rubra, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14979..15194)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas rubra ATCC 29570 RepID=U1KCX0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:ERG44714.1}; TaxID=1117318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseud
BD02T64_scaffold_2211_21
unknown

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comp(15316..15606)
DNA (291bp) protein (97aa)

This feature has no annotations

BD02T64_scaffold_2211_22
unknown

Not on your lists

comp(15679..16137)
DNA (459bp) protein (153aa)

This feature has no annotations

BD02T64_scaffold_2211_23
Marinomonas sp. S3726, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16359..18038)
DNA (1680bp) protein (560aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ12544.1}; TaxID=579484 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas sp. S3726.;"
BD02T64_scaffold_2211_24
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18038..18997)
DNA (960bp) protein (320aa)
Transposition helper protein n=5 Tax=Pseudomonas syringae pv. actinidiae RepID=S6P6S1_PSESF rbh
Uncharacterized protein {ECO:0000313|EMBL:KFJ89606.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-
bacterial TniB family protein
BD02T64_scaffold_2211_25
Paraglaciecola mesophila, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18999..19802)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LRP4_PHOPR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAC26663.1}; TaxID=1128912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
Displaying 25 items

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