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BD02T64_scaffold_2224

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2224_1
unknown

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2..121
DNA (120bp) protein (40aa)

This feature has no annotations

BD02T64_scaffold_2224_2
Psychromonas ingrahamii, Psychromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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225..548
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Psychromonas ingrahamii (strain 37) RepID=A1SRX6_PSYIN rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM02241.1}; TaxID=357804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Psychromonadaceae; Psychromonas.;" source="Psychromonas ing
BD02T64_scaffold_2224_3
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(538..888)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4ST65_META2 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE22775.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicro
BD02T64_scaffold_2224_4
Shewanella frigidimarina, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1313..1531
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Shewanella frigidimarina (strain NCIMB 400) RepID=Q07WS9_SHEFN rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI73535.1}; TaxID=318167 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella frigidimar
BD02T64_scaffold_2224_5
Halomonas sp. R57-5, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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1622..1996
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Teredinibacter turnerae (strain ATCC 39867 / T7901) RepID=C5BJ67_TERTT rbh
Uncharacterized protein {ECO:0000313|EMBL:CEP34851.1}; TaxID=1610576 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. R57-5
hypothetical protein
BD02T64_scaffold_2224_6

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2174..2524
DNA (351bp) protein (117aa)
Cold shock protein CspA n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HUN0_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:KKK65651.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cspA; cold shock protein (beta-ribbon, CspA family)
BD02T64_scaffold_2224_7
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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2669..3148
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GPZ3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPJ54161.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
hypothetical protein
BD02T64_scaffold_2224_8
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3145..3654
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Teredinibacter turnerae (strain ATCC 39867 / T7901) RepID=C5BRD1_TERTT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR11982.1}; TaxID=377629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadales genera incertae sedis; Teredinibacter.;" so
BD02T64_scaffold_2224_9
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3657..4094
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DG56_9BACT rbh
hypothetical protein; K07117 Tax=CG_Rhodof_04
hypothetical protein
BD02T64_scaffold_2224_10
Methylophaga frappieri, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4139..4966)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YIN0_METFJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFJ02773.1}; TaxID=754477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga fra
BD02T64_scaffold_2224_11
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5181..6068)
DNA (888bp) protein (296aa)
Transcriptional regulator, LysR family n=1 Tax=Oleispira antarctica RB-8 RepID=R4YUN8_OLEAN rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CCK78013.1}; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleispira.;" source="Oleispira antarctica
LysR family transcriptional regulator
BD02T64_scaffold_2224_12

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6214..6765
DNA (552bp) protein (184aa)
Cytochrome B561 n=1 Tax=Pseudoalteromonas luteoviolacea 2ta16 RepID=V4H9Q4_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN62930.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cytochrome b561
BD02T64_scaffold_2224_13

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6800..7375
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C7P7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN62931.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BD02T64_scaffold_2224_14
Winogradskyella sp. PG-2, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7389..8102
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00036CA616
possible Pirin family proteins
Possible Pirin family proteins {ECO:0000313|EMBL:BAO77524.1}; TaxID=754409 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradsky
BD02T64_scaffold_2224_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8154..8621
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XL13_SORCE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33872.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
BD02T64_scaffold_2224_16
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8807..10273
DNA (1467bp) protein (489aa)
hypothetical protein n=1 Tax=unclassified Zetaproteobacteria RepID=UPI00035FFC4A
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:KGJ92883.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia ps
nitrate/nitrite transporter
BD02T64_scaffold_2224_17
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10352..12091
DNA (1740bp) protein (580aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI0003824540
Protein serine/threonine phosphatase {ECO:0000313|EMBL:KGJ92884.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia p
protein serine/threonine phosphatase
BD02T64_scaffold_2224_18
Lentisphaera araneosa, Lentisphaera, Lentisphaerales, Lentisphaeria, Lentisphaerae, Bacteria

Not on your lists

12396..13088
DNA (693bp) protein (231aa)
Acetyl xylan esterase A n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DRW1_9BACT rbh
Acetyl xylan esterase A {ECO:0000313|EMBL:EDM25646.1}; TaxID=313628 species="Bacteria; Lentisphaerae; Lentisphaeria; Lentisphaerales; Lentisphaeraceae; Lentisphaera.;" source="Lentisphaera araneosa HT
hypothetical protein
BD02T64_scaffold_2224_19
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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13134..13694
DNA (561bp) protein (187aa)
RNA polymerase sigma factor n=1 Tax=Bacillus cereus 95/8201 RepID=C2TMP3_BACCE rbh
RNA polymerase sigma factor SigZ {ECO:0000313|EMBL:KHD05614.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus
RNA polymerase, sigma subunit, SigZ
BD02T64_scaffold_2224_20
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13787..14284
DNA (498bp) protein (166aa)
arsI; Lactoylglutathione lyase (glyoxalase family) CMGI-7 (EC:4.4.1.5)
Lactoylglutathione lyase (Glyoxalase family) CMGI-7 n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EIC3_9BURK rbh
Lactoylglutathione lyase (Glyoxalase family) CMGI-7 {ECO:0000313|EMBL:EKZ99110.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;
BD02T64_scaffold_2224_21
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14322..16778)
DNA (2457bp) protein (819aa)
FAD/FMN-containing dehydrogenases-like protein n=1 Tax=gamma proteobacterium BDW918 RepID=I2JKU7_9GAMM rbh
FAD/FMN-containing dehydrogenases-like protein {ECO:0000313|EMBL:EIF43599.1}; TaxID=1168065 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium BDW918.;"
FAD binding domain-containing protein
BD02T64_scaffold_2224_22
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16834..17793
DNA (960bp) protein (320aa)
FAD/FMN-containing dehydrogenases-like protein n=1 Tax=gamma proteobacterium BDW918 RepID=I2JKU6_9GAMM rbh
FAD/FMN-containing dehydrogenases-like protein {ECO:0000313|EMBL:EIF43598.1}; TaxID=1168065 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium BDW918.;"
FAD/FMN-containing dehydrogenases-like protein
BD02T64_scaffold_2224_23
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17798..18502
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI000364B5B3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ93919.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
acetyltransferase
BD02T64_scaffold_2224_24
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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18754..18858
DNA (105bp) protein (35aa)
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
BD02T64_scaffold_2224_25
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

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19198..19476
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI00036D9131 rbh
Uncharacterized protein {ECO:0000313|EMBL:EAW32636.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143.;"
hypothetical protein
BD02T64_scaffold_2224_26
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19481..19702
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C395_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE16802.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophil
Displaying 26 items

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