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BD02T64_scaffold_2342

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2342_1
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..374
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T317_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAP78636.1}; TaxID=314267 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter sp
hypothetical protein
BD02T64_scaffold_2342_2
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

452..772
DNA (321bp) protein (107aa)
Site-specific recombinase, resolvase family n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T330_9RHOB
Site-specific recombinase, resolvase family {ECO:0000313|EMBL:KHQ49802.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" sourc
site-specific recombinase
BD02T64_scaffold_2342_3
Thalassobium sp. R2A62, Thalassobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(784..2034)
DNA (1251bp) protein (417aa)
Putative uncharacterized protein n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DCR7_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EET46268.1}; TaxID=633131 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobium.;" source="Thalassobium sp.
BD02T64_scaffold_2342_4
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2027..3550)
DNA (1524bp) protein (508aa)
Type II restriction enzyme n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DCR8_9RHOB
Type II restriction-modification system restriction subunit {ECO:0000313|EMBL:KAJ02573.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfit
hypothetical protein
BD02T64_scaffold_2342_5
R_OD1_Kaiserbacteria_52_12b, Kaiserbacteria, Parcubacteria, Bacteria

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comp(3632..5140)
DNA (1509bp) protein (503aa)
hypothetical protein n=1 Tax=WS1 bacterium JGI 0000059-K21 RepID=UPI000378000D rbh
methyltransferase, HsdM related Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_52_12b_curated
BD02T64_scaffold_2342_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5089..6123)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00037F4CDC rbh
DNA methylase C-5 cytosine-specific family {ECO:0000313|EMBL:CCY43194.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;"
C-5 cytosine-specific family DNA methylase
BD02T64_scaffold_2342_7
Roseobacter denitrificans, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6127..6432)
DNA (306bp) protein (102aa)
Partition protein ParB n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q07GB9_ROSDO rbh
partition protein ParB
Partition protein ParB {ECO:0000313|EMBL:ABI93480.1}; TaxID=375451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter denitri
BD02T64_scaffold_2342_8
Roseobacter denitrificans, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6416..7084)
DNA (669bp) protein (223aa)
Partition protein ParA n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q07GB8_ROSDO rbh
parA; partition protein ParA
Partition protein ParA {ECO:0000313|EMBL:ABI93481.1}; TaxID=375451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter denitri
BD02T64_scaffold_2342_9
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7196..8230)
DNA (1035bp) protein (345aa)
RepA n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9Q7S5_9RHOB rbh
plasmid replication initiator rbh
Plasmid replication initiator {ECO:0000313|EMBL:AJE49512.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribact
BD02T64_scaffold_2342_10
unknown

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comp(8298..8528)
DNA (231bp) protein (77aa)

This feature has no annotations

BD02T64_scaffold_2342_11

Not on your lists

comp(8504..8941)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U4A0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKN55389.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BD02T64_scaffold_2342_12
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8960..10633)
DNA (1674bp) protein (558aa)
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U499_9RHOB rbh
Type IV secretory pathway, VirD4 component {ECO:0000313|EMBL:KGM85949.1}; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source
virD; virD4 protein, putative
BD02T64_scaffold_2342_13

Not on your lists

comp(10633..10944)
DNA (312bp) protein (104aa)
Mobilization protein n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q07GD0_ROSDO rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN55387.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
mobilization protein
BD02T64_scaffold_2342_14

Not on your lists

11187..11591
DNA (405bp) protein (135aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN55386.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BD02T64_scaffold_2342_15
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11567..12853
DNA (1287bp) protein (429aa)
Mobilization protein n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q07GC8_ROSDO rbh
Molybdopterin-guanine dinucleotide biosynthesis protein MobA {ECO:0000313|EMBL:KGM46623.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oce
mobL; mobilization protein
BD02T64_scaffold_2342_16
Thioclava dalianensis, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12843..13181)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q07GC7_ROSDO rbh
Uncharacterized protein {ECO:0000313|EMBL:KEP68453.1}; TaxID=1185766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava dalianens
hypothetical protein
BD02T64_scaffold_2342_17

Not on your lists

comp(13355..13891)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6E2C6_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN55383.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BD02T64_scaffold_2342_18
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14376..15260
DNA (885bp) protein (295aa)
Antirestriction protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U4B1_9RHOB
Antirestriction protein {ECO:0000313|EMBL:KHQ49797.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. U
hypothetical protein
BD02T64_scaffold_2342_19
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15543..17678
DNA (2136bp) protein (712aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KJ36_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KHQ49798.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. U
hypothetical protein
BD02T64_scaffold_2342_20
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17834..18493
DNA (660bp) protein (220aa)
UPI0003D1BA85 related cluster n=1 Tax=unknown RepID=UPI0003D1BA85 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHQ49799.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. U
hypothetical protein
BD02T64_scaffold_2342_21

Not on your lists

18563..18994
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T2C7_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKL93516.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase
BD02T64_scaffold_2342_22
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18991..19068
DNA (78bp) protein (26aa)
Probable insertion sequence transposase protein {ECO:0000313|EMBL:EDM71690.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" so
Displaying 22 items

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