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BD02T64_scaffold_2356

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2356_1
unknown

Not on your lists

527..718
DNA (192bp) protein (64aa)

This feature has no annotations

BD02T64_scaffold_2356_2
unknown

Not on your lists

comp(975..1214)
DNA (240bp) protein (80aa)

This feature has no annotations

BD02T64_scaffold_2356_3
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1180..2241)
DNA (1062bp) protein (354aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobact
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LUB8_DINSH
glucose-1-phosphate thymidylyltransferase
BD02T64_scaffold_2356_4
Roseobacter denitrificans, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2243..3136)
DNA (894bp) protein (298aa)
rfbD; dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:ABI93427.1}; EC=1.1.1.133 {ECO:0000313|EMBL:ABI93427.1};; TaxID=375451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodo
dTDP-4-dehydrorhamnose reductase n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JRM8_9RHOB rbh
BD02T64_scaffold_2356_5
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3133..4173)
DNA (1041bp) protein (347aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodo
dTDP-glucose 4,6-dehydratase n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LUB5_DINSH
dTDP-glucose 4,6-dehydratase
BD02T64_scaffold_2356_6
Roseovarius sp. BRH_c41, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4170..4742)
DNA (573bp) protein (191aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Citreicella sp. 357 RepID=I1AXE2_9RHOB rbh
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:KJS45615.1}; TaxID=1629709 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Rose
BD02T64_scaffold_2356_7

Not on your lists

comp(4965..6317)
DNA (1353bp) protein (451aa)
Polysaccharide export protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TY59_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKM68519.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative polysaccharide biosynthesis/export protein
BD02T64_scaffold_2356_8
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6532..7122)
DNA (591bp) protein (197aa)
Transcription termination/antitermination protein nusG n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SJ15_9RHOB
Transcription termination/antitermination protein nusG {ECO:0000256|RuleBase:RU000538}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalass
nusG2; transcription antitermination protein NusG
BD02T64_scaffold_2356_9
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7180..7839)
DNA (660bp) protein (220aa)
Undecaprenyl-galactosyl transferase n=1 Tax=Roseobacter sp. GAI101 RepID=B7RKZ9_9RHOB rbh
putative glycosyltransferase
Tax=BJP_08E140C01_Roseovarius_63_250
BD02T64_scaffold_2356_10
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8746..9720)
DNA (975bp) protein (325aa)
UDP-glucose 4-epimerase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VHH7_9RHOB rbh
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EAQ12168.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
NAD-dependent dehydratase
BD02T64_scaffold_2356_11
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10084..11232
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BB84_9RHIZ rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK59487.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium den
BD02T64_scaffold_2356_12
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11280..12734)
DNA (1455bp) protein (485aa)
hypothetical protein n=1 Tax=Oceanicola sp. S124 RepID=UPI00025593E6 rbh
hypothetical protein
Tax=BJP_IG2158_Rhodobacterales_64_37
BD02T64_scaffold_2356_13
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12737..13411)
DNA (675bp) protein (225aa)
family 2 glycosyl transferase n=1 Tax=Oceanicola sp. S124 RepID=UPI00025593E7 rbh
glycosyl transferase
Tax=BJP_IG2158_Rhodobacterales_64_37
BD02T64_scaffold_2356_14
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13411..14163)
DNA (753bp) protein (251aa)
Glycosyl transferase family 2 n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EHX3_9RHIZ rbh
glycosyl transferase
Tax=BJP_IG2158_Rhodobacterales_64_37
BD02T64_scaffold_2356_15
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14160..15212)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Oceanicola sp. S124 RepID=UPI0002557D5A rbh
hypothetical protein
Tax=BJP_IG2158_Rhodobacterales_64_37
BD02T64_scaffold_2356_16
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15222..15626)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Oceanicola sp. S124 RepID=UPI0002557D59
hypothetical protein
Tax=BJP_IG2158_Rhodobacterales_64_37
BD02T64_scaffold_2356_17
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15853..16848
DNA (996bp) protein (332aa)
glycosyl transferase n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B58D09 rbh
glycosyltransferase
Uncharacterized protein {ECO:0000313|EMBL:CAD76159.1}; TaxID=243090 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula bal
BD02T64_scaffold_2356_18
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17039..17635
DNA (597bp) protein (199aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO32878.1}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amni
id=2171278 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria rbh
BD02T64_scaffold_2356_19
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17876..18877
DNA (1002bp) protein (334aa)
radical SAM protein n=1 Tax=Oceanicola sp. S124 RepID=UPI00025593E5
radical SAM protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
radical SAM protein
BD02T64_scaffold_2356_20
Acinetobacter sp. NIPH 2171, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19356..20057
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B4914B rbh
Uncharacterized protein {ECO:0000313|EMBL:ENX11775.1}; TaxID=1217693 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp.
hypothetical protein
Displaying 20 items

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