ggKbase home page

BD02T64_scaffold_2564

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2564_1
Glaciecola punicea, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..431)
DNA (429bp) protein (143aa)
ISPpu13, transposase Orf2 n=1 Tax=Glaciecola punicea DSM 14233 = ACAM 611 RepID=H5TD38_9ALTE
ISPpu13, transposase Orf2 {ECO:0000313|EMBL:GAB56215.1}; TaxID=1121923 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola punic
IS66 family element, transposase
BD02T64_scaffold_2564_2
Glaciecola punicea, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(431..946)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Glaciecola punicea DSM 14233 = ACAM 611 RepID=H5TD37_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:GAB56214.1}; TaxID=1121923 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola punicea
putative transposase
BD02T64_scaffold_2564_3
unknown

Not on your lists

1012..1299
DNA (288bp) protein (96aa)

This feature has no annotations

BD02T64_scaffold_2564_4
Glaciecola punicea, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1343..1675)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Glaciecola punicea DSM 14233 = ACAM 611 RepID=H5TD35_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:GAB56212.1}; TaxID=1121923 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola punicea
BD02T64_scaffold_2564_5
Xenorhabdus szentirmaii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1802..2011)
DNA (210bp) protein (70aa)
Transposase n=1 Tax=Xenorhabdus bovienii (strain SS-2004) RepID=D3V3K6_XENBS
Transposase {ECO:0000313|EMBL:CDL84092.1}; TaxID=1427518 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus szentirmaii D
transposase
BD02T64_scaffold_2564_6
Nitrincola lacisaponensis, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2164..4575)
DNA (2412bp) protein (804aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI00036D1849 rbh
Transport protein {ECO:0000313|EMBL:KDE40412.1}; TaxID=267850 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola lacisaponensis.;"
RND superfamily exporter
BD02T64_scaffold_2564_7
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4559..5704)
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI00035E319C rbh
hypothetical protein
Uncharacterized protein related to plant photosystem II stability/assembly factor {ECO:0000313|EMBL:ABC31286.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales;
BD02T64_scaffold_2564_8
RLO_Pseudomonas_59_9, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5833..7206)
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI00035DC651 rbh
hypothetical protein Tax=RifCSPlowO2_12_Pseudomonas_59_9_curated
hypothetical protein
BD02T64_scaffold_2564_9
unknown

Not on your lists

comp(7196..7300)
DNA (105bp) protein (35aa)

This feature has no annotations

BD02T64_scaffold_2564_10
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7269..8849)
DNA (1581bp) protein (527aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI00036DF1A0 rbh
Uncharacterized protein {ECO:0000313|EMBL:ELS24960.1}; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseu
hypothetical protein
BD02T64_scaffold_2564_11
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9219..10454
DNA (1236bp) protein (412aa)
putative acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S7X2_9BURK rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EHP41371.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilen
BD02T64_scaffold_2564_12
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10466..11716
DNA (1251bp) protein (417aa)
thiolase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B77BDD rbh
Acetyl-CoA C-acyltransferase {ECO:0000313|EMBL:EIF42447.1}; TaxID=1168065 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium BDW918.;"
hypothetical protein
BD02T64_scaffold_2564_13
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11726..13321
DNA (1596bp) protein (532aa)
AMP-dependent synthetase and ligase n=1 Tax=Azoarcus sp. KH32C RepID=H0PTP2_9RHOO rbh
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:BAL24207.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. K
BD02T64_scaffold_2564_14
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13357..14472
DNA (1116bp) protein (372aa)
saccharopine dehydrogenase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B36597 rbh
Saccharopine dehydrogenase {ECO:0000313|EMBL:EIF42451.1}; TaxID=1168065 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium BDW918.;"
hypothetical protein
BD02T64_scaffold_2564_15
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14605..15414
DNA (810bp) protein (270aa)
dehydrogenase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B35759 rbh
Dehydrogenase {ECO:0000313|EMBL:EIF42439.1}; TaxID=1168065 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium BDW918.;"
dehydrogenase
BD02T64_scaffold_2564_16
Photobacterium profundum, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15465..15848
DNA (384bp) protein (128aa)
Hypothetical transposase IS630 family n=1 Tax=Photobacterium profundum RepID=Q6LHB0_PHOPR
transposase
Hypothetical transposase {ECO:0000313|EMBL:CAG22713.1}; Uncharacterized protein {ECO:0000313|EMBL:CAG20109.1}; TaxID=74109 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibriona
BD02T64_scaffold_2564_17
Acinetobacter johnsonii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15946..18645
DNA (2700bp) protein (900aa)
LuxR family transcriptional regulator n=1 Tax=Acinetobacter sp. P8-3-8 RepID=UPI0002487D90 rbh
Uncharacterized protein {ECO:0000313|EMBL:ENV72938.1}; TaxID=1217662 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter john
LuxR family ATP-dependent transcriptional regulator
BD02T64_scaffold_2564_18
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18827..18922)
DNA (96bp) protein (32aa)
Uncharacterized protein {ECO:0000313|EMBL:KGJ88336.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
Displaying 18 items

View Taxonomy