ggKbase home page

BD02T64_scaffold_2665

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2665_1
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..195)
DNA (195bp) protein (65aa)
Transposon related ORF, HTH transcriptional regulator n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YFU4_9GAMM
Transposon related ORF, HTH transcriptional regulator {ECO:0000313|EMBL:EAW30194.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma
transposase orfA
BD02T64_scaffold_2665_2
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(243..440)
DNA (198bp) protein (66aa)
metal dependent phosphohydrolase (EC:3.1.3.5)
Putative HD superfamily hydrolase n=1 Tax=Methylomicrobium album BG8 RepID=H8GGX9_METAL
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AEG00221.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylom
BD02T64_scaffold_2665_3
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(833..1162)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZZ06_9BACT rbh
Tax=BJP_IG2102_Gammaproteobacteria_62_140
BD02T64_scaffold_2665_4
R_Gammaproteobacteria_37_34, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1159..2139)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AF72_9BACT
parB; chromosome-partitioning protein parB Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_37_34_curated
parB-like partition protein
BD02T64_scaffold_2665_5
GWE2_Gammaproteobacteria_37_16_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2140..3021)
DNA (882bp) protein (294aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=uncultured bacterium RepID=K2AYU6_9BACT
ParA partition protein Tax=GWE2_Gammaproteobacteria_37_16_curated
Putative ParA partition protein
BD02T64_scaffold_2665_6
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3138..4061
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RVT2_ACCPU rbh
Plasmid replication initiator protein TrfA {ECO:0000313|EMBL:EXI72040.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulib
hypothetical protein
BD02T64_scaffold_2665_7
Methylophaga aminisulfidivorans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5398..5940
DNA (543bp) protein (181aa)
Transcriptional regulator, Fis family n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5T0P3_9GAMM
Transcriptional regulator, Fis family {ECO:0000313|EMBL:EGL53833.1}; TaxID=1026882 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="M
BD02T64_scaffold_2665_8
Paraglaciecola arctica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6188..6442
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6XG65_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:GAC19654.1}; TaxID=493475 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
hypothetical protein
BD02T64_scaffold_2665_9
Acinetobacter sp. Ver3, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6435..7634
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Acinetobacter parvus NIPH 1103 RepID=N8RDA6_9GAMM rbh
Phosphatidylinositol kinase {ECO:0000313|EMBL:EZQ00965.1}; TaxID=466088 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter s
HipA domain-containing protein rbh
BD02T64_scaffold_2665_10
Vibrio ichthyoenteri, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7699..8658)
DNA (960bp) protein (320aa)
Putative Mfp1 (Mar binding filament-like protein 1) n=3 Tax=Vibrio nigripulchritudo RepID=U4HKN7_9VIBR rbh
Uncharacterized protein {ECO:0000313|EMBL:EGU46202.1}; TaxID=870968 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio ichthyoenteri ATCC 70002
putative kinesin K39
BD02T64_scaffold_2665_11
Thalassolituus oleivorans, Thalassolituus, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10246..10473)
DNA (228bp) protein (76aa)
HipA domain protein n=1 Tax=Thalassolituus oleivorans MIL-1 RepID=M5DSF5_9GAMM
HipA domain protein
HipA domain protein {ECO:0000313|EMBL:CCU72453.1}; TaxID=1298593 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Thalassolituus.;" source="Thalassolituus oleivorans MIL-1.;"
BD02T64_scaffold_2665_12
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10502..10747)
DNA (246bp) protein (82aa)
DNA-binding helix-turn-helix protein id=1730763 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes rbh
XRE family transcriptional regulator Tax=GWC2_Bacteroidetes_46_850_curated
XRE family transcriptional regulator
BD02T64_scaffold_2665_13
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10904..11749)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SMS4_METPP rbh
Uncharacterized protein {ECO:0000313|EMBL:CDI04354.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competib
hypothetical protein
BD02T64_scaffold_2665_14
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12092..12967
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00037732A9
Uncharacterized protein {ECO:0000313|EMBL:EIC29821.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrob
BD02T64_scaffold_2665_15
unknown

Not on your lists

12964..13059
DNA (96bp) protein (32aa)

This feature has no annotations

BD02T64_scaffold_2665_16
unknown

Not on your lists

13181..13486
DNA (306bp) protein (102aa)

This feature has no annotations

BD02T64_scaffold_2665_17
RLO_Sulfurimonas_36_12, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

13693..14226
DNA (534bp) protein (178aa)
Putative uncharacterized protein n=1 Tax=Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) RepID=D5V383_ARCNC rbh
hypothetical protein Tax=RifCSPlowO2_12_Sulfurimonas_36_12_curated
hypothetical protein
BD02T64_scaffold_2665_18
Photobacterium profundum, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14762..15478
DNA (717bp) protein (239aa)
Putative Endonuclease I [Photobacterium profundum SS9] n=1 Tax=Photobacterium profundum RepID=Q6LWB0_PHOPR
putative endonuclease I
Putative Endonuclease I [Photobacterium profundum SS9] {ECO:0000313|EMBL:CAG17967.1}; TaxID=74109 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" s
BD02T64_scaffold_2665_19
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16461..16724
DNA (264bp) protein (88aa)
Transposon related ORF, HTH transcriptional regulator n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YFU4_9GAMM rbh
Transposon related ORF, HTH transcriptional regulator {ECO:0000313|EMBL:EAW30194.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma
transposase orfA
Displaying 19 items

View Taxonomy