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BD02T64_scaffold_2701

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2701_1
gamma proteobacterium IMCC2047, Gammaproteobacteria, Proteobacteria, Bacteria

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2..754
DNA (753bp) protein (251aa)
hrpB; ATP-dependent helicase HrpB (EC:3.6.1.-)
ATP-dependent helicase HrpB n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KDA9_9GAMM
ATP-dependent helicase HrpB {ECO:0000313|EMBL:EGG99640.1}; TaxID=434085 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium IMCC2047.;"
BD02T64_scaffold_2701_2
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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956..2305
DNA (1350bp) protein (450aa)
GTPase HflX n=1 Tax=Oleispira antarctica RB-8 RepID=R4YPE2_OLEAN
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleis
GTP-binding protein HflX
BD02T64_scaffold_2701_3
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

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2632..2799
DNA (168bp) protein (56aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037E51B2 rbh
Uncharacterized protein {ECO:0000313|EMBL:EAW30793.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143.;"
BD02T64_scaffold_2701_4
Pseudoalteromonas spongiae, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2931..3368)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas spongiae UST010723-006 RepID=U1M5N7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERG53758.1}; TaxID=1117319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseud
hypothetical protein
BD02T64_scaffold_2701_5
Idiomarina salinarum, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3790..5400
DNA (1611bp) protein (537aa)
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=2 Tax=Idiomarina loihiensis RepID=PCKA_IDILO
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:00
BD02T64_scaffold_2701_6
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5625..5942)
DNA (318bp) protein (106aa)
Transcriptional regulator, XRE family n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RQB3_ALLVD rbh
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ADC61718.1}; TaxID=572477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochr
BD02T64_scaffold_2701_7
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5956..6258)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RQB2_ALLVD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC61717.1}; TaxID=572477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosu
BD02T64_scaffold_2701_8
Marinomonas sp. S3726, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6390..6998)
DNA (609bp) protein (203aa)
DNA-N1-methyladenine dioxygenase (EC:1.14.11.-)
Oxidoreductase, 2OG-Fe(II) oxygenase family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y5C8_9GAMM rbh
DNA methylase {ECO:0000313|EMBL:KJZ10958.1}; TaxID=579484 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas sp. S3726.;"
BD02T64_scaffold_2701_9
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7011..7856)
DNA (846bp) protein (282aa)
Transcriptional regulator, AraC family n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PSH1_MURRD
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEM69230.1}; TaxID=886377 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda
BD02T64_scaffold_2701_10

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comp(8005..8865)
DNA (861bp) protein (287aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN27166.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BD02T64_scaffold_2701_11

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comp(9096..9620)
DNA (525bp) protein (175aa)
Acetyltransferase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JRV2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN55433.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
acetyltransferase
BD02T64_scaffold_2701_12
Shewanella denitrificans, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9607..10485)
DNA (879bp) protein (293aa)
LysR, substrate-binding n=1 Tax=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) RepID=Q12R71_SHEDO
LysR, substrate-binding
LysR, substrate-binding {ECO:0000313|EMBL:ABE54055.1}; TaxID=318161 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella denitrific
BD02T64_scaffold_2701_13
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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10627..11367
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000378C378 rbh
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AFU03892.1}; TaxID=1133849 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis ATCC
BD02T64_scaffold_2701_14
Marinobacter sp. BSs20148, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11381..11755
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Marinobacter sp. BSs20148 RepID=M1FGC3_9ALTE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFP32330.1}; TaxID=490759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp.
BD02T64_scaffold_2701_15
Grimontia sp. AD028, Grimontia, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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11778..11981
DNA (204bp) protein (68aa)
Tautomerase {ECO:0000256|RuleBase:RU362032}; EC=5.3.2.- {ECO:0000256|RuleBase:RU362032};; TaxID=1581149 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grimontia.;"
tautomerase n=1 Tax=Dasania marina RepID=UPI00037BD491
4-oxalocrotonate tautomerase
BD02T64_scaffold_2701_16
Vibrio coralliilyticus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12123..12887)
DNA (765bp) protein (255aa)
Family 3 extracellular solute-binding protein n=1 Tax=Pseudoalteromonas rubra ATCC 29570 RepID=U1KIM3_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KJY70233.1}; TaxID=190893 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio coralliilyticus.;"
amino acid-binding protein
BD02T64_scaffold_2701_17
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

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13017..14510
DNA (1494bp) protein (498aa)
Diguanylate cyclase n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KK18_SIMAS rbh
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AFU98373.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 1
BD02T64_scaffold_2701_18
Bermanella marisrubri, Bermanella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14611..15108)
DNA (498bp) protein (166aa)
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Bermanella marisrubri RepID=Q1N3U7_9GAMM rbh
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:EAT12777.1}; TaxID=207949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Bermanella.;" source="Bermanella marisrubri.;
Fur family transcriptional regulator
BD02T64_scaffold_2701_19
Methylophaga nitratireducenticrescens, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15163..15528)
DNA (366bp) protein (122aa)
MerC mercury resistance protein n=1 Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XJF2_METNJ rbh
merC mercury resistance protein
Methylophaga nitratireducenticrescens strain JAM1, complete genome {ECO:0000313|EMBL:AFI84521.1}; TaxID=754476 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiacea
BD02T64_scaffold_2701_20
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(15634..16380)
DNA (747bp) protein (249aa)
Glutamine amidotransferase n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4AVD0_MARSH rbh
glutamine amidotransferase
Glutamine amidotransferase {ECO:0000313|EMBL:EAR00152.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter.;" source="Maribacter sp. (stra
Displaying 20 items

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