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BD02T64_scaffold_1102

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1102_1
unknown

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3..230
DNA (228bp) protein (76aa)

This feature has no annotations

BD02T64_scaffold_1102_2
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(227..2182)
DNA (1956bp) protein (652aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KLX8_SIMAS
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:AFU99088.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 /
BD02T64_scaffold_1102_3
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2367..4949)
DNA (2583bp) protein (861aa)
ClpB protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YPZ3_9GAMM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
ATP-dependent chaperone ClpB
BD02T64_scaffold_1102_4
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5077..5391)
DNA (315bp) protein (105aa)
NIF3 1 n=1 Tax=Pseudomonas sp. S9 RepID=UPI000255753F rbh
Uncharacterized protein {ECO:0000313|EMBL:ENO17092.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter nanh
hypothetical protein
BD02T64_scaffold_1102_5
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5425..6315)
DNA (891bp) protein (297aa)
Thioredoxin n=1 Tax=Congregibacter litoralis KT71 RepID=A4A5R1_9GAMM
Thioredoxin {ECO:0000313|EMBL:EAQ98358.1}; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Congregibacter.;" source="Congregibacter litoralis KT71.;"
thioredoxin
BD02T64_scaffold_1102_6
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6336..10238)
DNA (3903bp) protein (1301aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3) rbh
phosphoribosylformylglycinamidine synthase n=1 Tax=Gilvimarinus chinensis RepID=UPI000382AA39
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule
BD02T64_scaffold_1102_7
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10726..12648
DNA (1923bp) protein (641aa)
Putative serine protein kinase, PrkA n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21MT4_SACD2
Putative serine protein kinase, PrkA {ECO:0000313|EMBL:ABD79995.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Sa
putative serine protein kinase, PrkA
BD02T64_scaffold_1102_8

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12671..13930
DNA (1260bp) protein (420aa)
UPF0229 protein M5M_15535 n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KM48_SIMAS
Uncharacterized protein {ECO:0000313|EMBL:KKN91724.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BD02T64_scaffold_1102_9
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13927..15474
DNA (1548bp) protein (516aa)
SpoVR family protein (EC:1.9.3.1)
SpoVR like family protein {ECO:0000313|EMBL:ACE83492.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ACE83492.1};; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadace
SpoVR like family protein n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PL48_CELJU
BD02T64_scaffold_1102_10
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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comp(15496..16596)
DNA (1101bp) protein (367aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A441
NAD-dependent epimerase/dehydratase Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
NAD-dependent epimerase/dehydratase
BD02T64_scaffold_1102_11
Mycobacterium gastri, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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16852..18579
DNA (1728bp) protein (576aa)
Aminoacylase n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WJT3_MYCKA
Aminoacylase {ECO:0000313|EMBL:ETW23372.1}; TaxID=1436723 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium gastri 'Wayne'.;"
aminoacylase
BD02T64_scaffold_1102_12
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18682..19860)
DNA (1179bp) protein (393aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:EGP06379.1}; EC=1.3.8.1 {ECO:0000313|EMBL:EGP06379.1};; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.
PREDICTED: long-chain specific acyl-CoA dehydrogenase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C178DA
acyl-CoA dehydrogenase
BD02T64_scaffold_1102_13
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20227..21405)
DNA (1179bp) protein (393aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:CDO60196.1}; EC=1.3.8.1 {ECO:0000313|EMBL:CDO60196.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;
PREDICTED: long-chain specific acyl-CoA dehydrogenase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C178DA
acyl-CoA dehydrogenase
BD02T64_scaffold_1102_14
Mycobacterium parascrofulaceum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(21444..21887)
DNA (444bp) protein (148aa)
MaoC-like protein n=1 Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5P1V4_9MYCO rbh
MaoC-like protein {ECO:0000313|EMBL:EFG79938.1}; TaxID=525368 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium parascrofulaceum ATCC BAA-6
acyl dehydratase
BD02T64_scaffold_1102_15
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21884..22423)
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4HT25_MYCRH rbh
Scaffold9, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31672.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
hypothetical protein
BD02T64_scaffold_1102_16
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(22440..22871)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CMF1_SYNLT rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:CQD23920.1}; TaxID=141349 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentiflavum.;"
hypothetical protein
BD02T64_scaffold_1102_17
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(22929..24107)
DNA (1179bp) protein (393aa)
Acetyl-CoA acetyltransferase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X745_9PSEU
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EHR53513.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina
thiolase
BD02T64_scaffold_1102_18
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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24862..27057
DNA (2196bp) protein (732aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00037C5EBC
sensory response regulator with diguanylate cyclase domain Tax=RBG_16_Gamma2_65_34_curated
response regulator receiver modulated diguanylate cyclase/phosphodiesterase
BD02T64_scaffold_1102_19
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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27082..29178
DNA (2097bp) protein (699aa)
Ligand-gated TonB-dependent outer membrane channel n=2 Tax=Geobacter metallireducens RepID=Q39V24_GEOMG rbh
TonB-denpendent receptor {ECO:0000313|EMBL:ETX02798.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
ligand-gated TonB-dependent outer membrane channel
BD02T64_scaffold_1102_20
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

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29182..29829
DNA (648bp) protein (216aa)
conserved hypothetical protein
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO44100.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
Uncharacterized protein id=3018606 bin=GWF2_Syntrophobacterales_56_9 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
BD02T64_scaffold_1102_21
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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29826..32165
DNA (2340bp) protein (780aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=765910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Marich
hypothetical protein n=1 Tax=Psychromonas ossibalaenae RepID=UPI0003754AA5 rbh
histidine kinase
BD02T64_scaffold_1102_22
unknown

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comp(32343..33065)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI00037D8BCB rbh
BD02T64_scaffold_1102_23
Geobacillus caldoxylosilyticus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(33308..34177)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Geobacillus caldoxylosilyticus RepID=UPI0002E5E2E7
Zn-dependent alcohol dehydrogenase {ECO:0000313|EMBL:GAJ41150.1}; TaxID=1220594 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus caldoxylosilyticus N
Zn-dependent alcohol dehydrogenase
Displaying 23 items

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