ggKbase home page

BD02T64_scaffold_1209

Search features with annotation key words

Displaying items 1-30 of 36 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1209_1
Oceanibulbus indolifex, Oceanibulbus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(553..1836)
DNA (1284bp) protein (428aa)
BNR repeat, putative n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DTK7_9RHOB rbh
BNR repeat, putative {ECO:0000313|EMBL:EDQ05823.1}; TaxID=391624 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanibulbus.;" source="Oceanibulbus indolif
hypothetical protein
BD02T64_scaffold_1209_2
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1778..2008)
DNA (231bp) protein (77aa)
Cytochrome c2 n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T2Z0_9RHOB rbh
Cytochrome c2 {ECO:0000313|EMBL:EAP78709.1}; TaxID=314267 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter sp. NAS-14.1
cytochrome c-551
BD02T64_scaffold_1209_3
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2732..4090)
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T2Y9_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAP78708.1}; TaxID=314267 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter sp
hypothetical protein
BD02T64_scaffold_1209_4
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4301..5368)
DNA (1068bp) protein (356aa)
Polyphosphate-selective porin O n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T2Y8_9RHOB rbh
Polyphosphate-selective porin O {ECO:0000313|EMBL:EAP78707.1}; TaxID=314267 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitob
phosphate-selective porin O and P
BD02T64_scaffold_1209_5
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5791..6153
DNA (363bp) protein (121aa)
NADH-quinone oxidoreductase subunit {ECO:0000256|RuleBase:RU003639}; EC=1.6.5.11 {ECO:0000256|RuleBase:RU003639};; TaxID=314267 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
NADH-quinone oxidoreductase subunit n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T2Y7_9RHOB rbh
NADH-ubiquinone/plastoquinone oxidoreductase chain 3
BD02T64_scaffold_1209_6
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6150..8063
DNA (1914bp) protein (638aa)
Copper-translocating P-type ATPase n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T2Y6_9RHOB rbh
Copper-translocating P-type ATPase {ECO:0000313|EMBL:EAP78705.1}; TaxID=314267 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfi
Ni Fe-hydrogenase III large subunit-like protein
BD02T64_scaffold_1209_7
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8060..8959
DNA (900bp) protein (300aa)
Respiratory-chain NADH dehydrogenase, subunit 1 n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T2Y5_9RHOB rbh
Respiratory-chain NADH dehydrogenase, subunit 1 {ECO:0000313|EMBL:EAP78704.1}; TaxID=314267 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;"
respiratory-chain NADH dehydrogenase subunit 1
BD02T64_scaffold_1209_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8956..9471
DNA (516bp) protein (172aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYQ7_BREDI rbh
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein {ECO:0000313|EMBL:EGF93938.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteracea
NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
BD02T64_scaffold_1209_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9468..9779
DNA (312bp) protein (104aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit
NADH-quinone oxidoreductase subunit K n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYQ8_BREDI rbh
NADH-ubiquinone oxidoreductase subunit 4L
BD02T64_scaffold_1209_10
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9776..11671
DNA (1896bp) protein (632aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH dehydrogenase subunit L n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T2Y2_9RHOB rbh
NADH dehydrogenase subunit L {ECO:0000313|EMBL:EAP78701.1}; TaxID=314267 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobact
BD02T64_scaffold_1209_11
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11689..13149
DNA (1461bp) protein (487aa)
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T2Y1_9RHOB rbh
Proton-translocating NADH-quinone oxidoreductase, chain M {ECO:0000313|EMBL:EAP78700.1}; TaxID=314267 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfito
BD02T64_scaffold_1209_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13149..14507
DNA (1359bp) protein (453aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYR1_BREDI rbh
BD02T64_scaffold_1209_13
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15671..16387)
DNA (717bp) protein (239aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobac
Aspartate-semialdehyde dehydrogenase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FT53_9RHOB
molecular chaperone GroES
BD02T64_scaffold_1209_14
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16713..16967)
DNA (255bp) protein (85aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobac
alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase (EC:1.1.1.284)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FT53_9RHOB
BD02T64_scaffold_1209_15
Oceanibulbus indolifex, Oceanibulbus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17121..17705
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E9K7_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EDQ04071.1}; TaxID=391624 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanibulbus.;" source="Oceanibulbus indo
hypothetical protein
BD02T64_scaffold_1209_16
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17666..19024)
DNA (1359bp) protein (453aa)
Atrazine chlorohydrolase n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E9K5_9RHOB rbh
N-formimino-L-glutamate deiminase {ECO:0000313|EMBL:KGL00389.1}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobacter.;" source="Thal
N-formimino-L-glutamate deiminase
BD02T64_scaffold_1209_17
Oceanibulbus indolifex, Oceanibulbus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19112..20323
DNA (1212bp) protein (404aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase
hutI; imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E9K3_9RHOB rbh
BD02T64_scaffold_1209_18
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20320..21858
DNA (1539bp) protein (513aa)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|R
hutH; histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase n=1 Tax=Roseovarius sp. TM1035 RepID=A6E617_9RHOB rbh
BD02T64_scaffold_1209_19
Oceanibulbus indolifex, Oceanibulbus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21855..22655
DNA (801bp) protein (267aa)
N-formylglutamate amidohydrolase, putative n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E9J7_9RHOB rbh
N-formylglutamate amidohydrolase, putative {ECO:0000313|EMBL:EDQ04067.1}; TaxID=391624 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanibulbus.;" source
N-formylglutamate amidohydrolase rbh
BD02T64_scaffold_1209_20
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22652..24319
DNA (1668bp) protein (556aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Roseovarius sp. TM1035 RepID=A6E618_9RHOB rbh
BD02T64_scaffold_1209_21
Roseobacter litoralis, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24359..25498)
DNA (1140bp) protein (380aa)
Alanine racemase-like protein n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZLD2_ROSLO rbh
alanine racemase rbh
Alanine racemase-like protein {ECO:0000313|EMBL:AEI92792.1}; TaxID=391595 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter
BD02T64_scaffold_1209_22
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25528..26217)
DNA (690bp) protein (230aa)
Transcriptional regulator, GntR family protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E9J3_9RHOB rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:KGL00384.1}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobacter.;" source="
hutC; histidine utilization repressor
BD02T64_scaffold_1209_23
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26412..27368
DNA (957bp) protein (319aa)
Uncharacterized protein {ECO:0000313|EMBL:KEO60751.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23-
Uncharacterized protein id=2514691 bin=GWF1_Rhodobacteraceae_65_7 species=Amphimedon queenslandica genus=Amphimedon taxon_order=Haplosclerida taxon_class=Demospongiae phylum=Porifera tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
binding-protein-dependent transport systems inner membrane component
BD02T64_scaffold_1209_24
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27373..28230
DNA (858bp) protein (286aa)
Uncharacterized protein {ECO:0000313|EMBL:KEO60750.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23-
Peptide ABC transporter, permease protein id=2514694 bin=GWF1_Rhodobacteraceae_65_7 species=Marinomonas sp. MED121 genus=Marinomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
binding-protein-dependent transport systems inner membrane component
BD02T64_scaffold_1209_25
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28234..29865
DNA (1632bp) protein (544aa)
Uncharacterized protein {ECO:0000313|EMBL:KEO60749.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23-
ABC transporter related protein id=2514699 bin=GWF1_Rhodobacteraceae_65_7 species=Sagittula stellata genus=Sagittula taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
ABC transporter-like protein
BD02T64_scaffold_1209_26
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29862..30932
DNA (1071bp) protein (357aa)
Ectoine utilization protein EutE n=1 Tax=Arthrobacter gangotriensis Lz1y RepID=M7MWJ8_9MICC rbh
Uncharacterized protein {ECO:0000313|EMBL:KEO60748.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23-
ectoine utilization protein EutE
BD02T64_scaffold_1209_27
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30929..31807)
DNA (879bp) protein (293aa)
phthalate 4,5-dioxygenase (EC:1.14.12.7)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000379380D rbh
Uncharacterized protein {ECO:0000313|EMBL:KEO60747.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23-
BD02T64_scaffold_1209_28
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31812..32099)
DNA (288bp) protein (96aa)
hmp; flavohemoprotein (EC:1.14.12.17)
Uncharacterized protein {ECO:0000313|EMBL:KEO60747.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23-
Flavohemoprotein-like protein id=2813707 bin=GWF1_Rhodobacteraceae_65_7 species=Moritella sp. PE36 genus=Moritella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
BD02T64_scaffold_1209_29
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32101..33141)
DNA (1041bp) protein (347aa)
(2Fe-2S)-binding protein {ECO:0000313|EMBL:KEO60746.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23
Vanillate O-demethylase oxygenase-like protein id=2813712 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=unknown taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
vanillate O-demethylase oxygenase
BD02T64_scaffold_1209_30
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33235..34176)
DNA (942bp) protein (314aa)
Uncharacterized protein {ECO:0000313|EMBL:KEO60745.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23-
LysR substrate-binding protein id=2813715 bin=GWF1_Rhodobacteraceae_65_7 species=Mesorhizobium ciceri genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
LysR family transcriptional regulator
Displaying items 1-30 of 36 in total

View Taxonomy