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BD02T64_scaffold_1255

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1255_1
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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219..1055
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YST6_AEQSU
Uncharacterized protein {ECO:0000313|EMBL:KJJ38443.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladiv
hypothetical protein
BD02T64_scaffold_1255_2
unknown

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comp(1883..2227)
DNA (345bp) protein (115aa)

This feature has no annotations

BD02T64_scaffold_1255_3
unknown

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comp(2199..2729)
DNA (531bp) protein (177aa)

This feature has no annotations

BD02T64_scaffold_1255_4
Flavobacteriales bacterium ALC-1, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2814..3431)
DNA (618bp) protein (206aa)
Phenazine biosynthesis PhzC/PhzF protein n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UGS8_9FLAO
Phenazine biosynthesis PhzC/PhzF protein {ECO:0000313|EMBL:EDP72045.1}; TaxID=391603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium ALC-1.;"
transcriptional regulator, AraC family
BD02T64_scaffold_1255_5
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3975..4634)
DNA (660bp) protein (220aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="
Ribulose-phosphate 3-epimerase n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J4K4_9FLAO rbh
ribulose-phosphate 3-epimerase
BD02T64_scaffold_1255_6
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4851..5714)
DNA (864bp) protein (288aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YST3_AEQSU rbh
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:KJJ38392.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibact
sigma-70 family RNA polymerase sigma factor rbh
BD02T64_scaffold_1255_7
unknown

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comp(5827..6258)
DNA (432bp) protein (144aa)
hypothetical protein
BD02T64_scaffold_1255_8
unknown

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comp(6309..6476)
DNA (168bp) protein (56aa)

This feature has no annotations

BD02T64_scaffold_1255_9
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6466..6762)
DNA (297bp) protein (99aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YST1_AEQSU
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AFL80049.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="A
BD02T64_scaffold_1255_10
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7048..7692)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YSS9_AEQSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL80047.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithinc
BD02T64_scaffold_1255_11
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7652..8077)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YSS9_AEQSU
Uncharacterized protein {ECO:0000313|EMBL:KJJ38389.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladiv
hypothetical protein
BD02T64_scaffold_1255_12
Flavobacteriales bacterium ALC-1, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8262..9590)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UKN5_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDP70310.1}; TaxID=391603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium ALC-1.;"
BD02T64_scaffold_1255_13
Winogradskyella sp. PG-2, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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9727..10239
DNA (513bp) protein (171aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UKN6_9FLAO
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAO74331.1}; TaxID=754409 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winog
BD02T64_scaffold_1255_14
Flavobacteriales bacterium ALC-1, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10295..11224
DNA (930bp) protein (310aa)
Possible anti-sigma factor n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UKN7_9FLAO
Possible anti-sigma factor {ECO:0000313|EMBL:EDP70312.1}; TaxID=391603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium ALC-1.;"
possible anti-sigma factor
BD02T64_scaffold_1255_15
Winogradskyella sp. PG-2, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11202..13532
DNA (2331bp) protein (777aa)
Uncharacterized protein n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UKN9_9FLAO
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:BAO74329.1}; TaxID=754409 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella sp
BD02T64_scaffold_1255_16
Dokdonia sp. 4H-3-7-5, Dokdonia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13656..15863)
DNA (2208bp) protein (736aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=983548
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
polynucleotide phosphorylase n=1 Tax=Gillisia marina RepID=UPI00029B2C0E rbh
BD02T64_scaffold_1255_17
unidentified eubacterium SCB49, Bacteroidetes, Bacteria

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comp(16041..16310)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=unidentified eubacterium SCB49 RepID=A6ERD6_9BACT rbh
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=50743 species="Bacteria; Bacteroidetes; environmental samples.;" source="unidentified eubacterium SCB4
30S ribosomal protein S15
BD02T64_scaffold_1255_18
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16612..16854
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:KJJ38385.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladiv
BD02T64_scaffold_1255_19
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16890..17789)
DNA (900bp) protein (300aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YSS3_AEQSU rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltr
acetyl-CoA carboxylase, carboxyl transferase subunit beta
BD02T64_scaffold_1255_20
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17805..18872)
DNA (1068bp) protein (356aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase, class II {ECO:0000313|EMBL:AFL80040.1}; EC=4.1.2.13 {ECO:0000313|EMBL:AFL80040.1};; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Fla
Fructose-bisphosphate aldolase, class II n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YSS2_AEQSU
BD02T64_scaffold_1255_21
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18991..21573)
DNA (2583bp) protein (861aa)
Outer membrane protein/protective antigen OMA87 n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YSS1_AEQSU rbh
Outer membrane protein/protective antigen OMA87 {ECO:0000313|EMBL:AFL80039.1}; Flags: Precursor;; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Ae
outer membrane protein/protective antigen OMA87
BD02T64_scaffold_1255_22
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21608..22336
DNA (729bp) protein (243aa)
rRNA methylase n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YSS0_AEQSU rbh
rRNA methylase
rRNA methylase {ECO:0000313|EMBL:AFL80038.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (stra
BD02T64_scaffold_1255_23
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22323..23000)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YSR9_AEQSU
PorT protein {ECO:0000313|EMBL:KJJ38381.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.
protein-translocating porin PorT
BD02T64_scaffold_1255_24
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23033..23764)
DNA (732bp) protein (244aa)
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriale
Demethylmenaquinone methyltransferase n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YSR8_AEQSU rbh
ubiquinone/menaquinone biosynthesis methyltransferase
BD02T64_scaffold_1255_25
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23899..25248
DNA (1350bp) protein (450aa)
K+ transport system, NAD-binding component n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YSR7_AEQSU rbh
Portal protein {ECO:0000313|EMBL:KJJ38379.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensi
K+ transport system, NAD-binding component
BD02T64_scaffold_1255_26
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25248..26753
DNA (1506bp) protein (502aa)
Trk-type K+ transport system, membrane component n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YSR6_AEQSU rbh
Trk-type K+ transport system, membrane component
Trk-type K+ transport system, membrane component {ECO:0000313|EMBL:AFL80034.1}; Flags: Precursor;; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; A
BD02T64_scaffold_1255_27
Lacinutrix sp. 5H-3-7-4, Lacinutrix, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26759..27592)
DNA (834bp) protein (278aa)
OmpA/MotB domain protein n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GG15_LACS5
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:AEH00852.1}; Flags: Precursor;; TaxID=983544 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Lacinutrix.;" source="Lac
BD02T64_scaffold_1255_28
CG_Flavo_01, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(27796..30723)
DNA (2928bp) protein (976aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YSR4_AEQSU rbh
hypothetical protein Tax=CG_Flavo_01
hypothetical protein
Displaying 28 items

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