ggKbase home page

BD02T64_scaffold_1314

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1314_1
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160..1512)
DNA (1353bp) protein (451aa)
Leucine rich repeat domain protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482I4_COLP3 rbh
leucine-rich repeat-containing protein
Leucine rich repeat domain protein {ECO:0000313|EMBL:AAZ26200.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia ps
BD02T64_scaffold_1314_2
Pseudoalteromonas arctica, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2056..2280
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas arctica A 37-1-2 RepID=U1KA01_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERG09391.1}; TaxID=1117313 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseud
transposase
BD02T64_scaffold_1314_3
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2341..3405)
DNA (1065bp) protein (355aa)
Putative membrane protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482I6_COLP3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ90079.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythrae
hypothetical protein
BD02T64_scaffold_1314_4
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3573..6059)
DNA (2487bp) protein (829aa)
ABC transporter, permease protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482I7_COLP3 rbh
ABC transporter, permease protein {ECO:0000313|EMBL:AAZ24127.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psy
ABC transporter permease rbh
BD02T64_scaffold_1314_5
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6049..6762)
DNA (714bp) protein (238aa)
ABC transporter, ATP-binding domain n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482I8_COLP3
ABC transporter ATP-binding protein
ABC transporter, ATP-binding domain {ECO:0000313|EMBL:AAZ26929.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia p
BD02T64_scaffold_1314_6
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6800..7381
DNA (582bp) protein (194aa)
Lipase/acylhydrolase, GDSL family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482I9_COLP3 rbh
GDSL family lipase/acylhydrolase
Lipase/acylhydrolase, GDSL family {ECO:0000313|EMBL:AAZ26246.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psy
BD02T64_scaffold_1314_7
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7608..9200
DNA (1593bp) protein (531aa)
Putative glutathione-regulated potassium-efflux system protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482J1_COLP3 rbh
glutathione-regulated potassium-efflux system protein
Putative glutathione-regulated potassium-efflux system protein {ECO:0000313|EMBL:AAZ26585.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwe
BD02T64_scaffold_1314_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9837..10604)
DNA (768bp) protein (256aa)
Hydrolase, TatD family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482J2_COLP3 rbh
Hydrolase, TatD family {ECO:0000313|EMBL:KGJ90074.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea
TatD family hydrolase
BD02T64_scaffold_1314_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10682..11008)
DNA (327bp) protein (109aa)
Putative type IV pilus biogenesis protein pilZ n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482J3_COLP3
type IV pilus biogenesis protein pilZ
Type IV pilus assembly PilZ {ECO:0000313|EMBL:KGJ90073.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychreryt
BD02T64_scaffold_1314_10
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11018..12019)
DNA (1002bp) protein (334aa)
holB; DNA polymerase III, delta prime subunit (EC:2.7.7.7)
DNA polymerase III, delta prime subunit {ECO:0000313|EMBL:AAZ25121.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AAZ25121.1};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
DNA polymerase III, delta prime subunit n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482J4_COLP3 rbh
BD02T64_scaffold_1314_11
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12028..12708)
DNA (681bp) protein (227aa)
tmk; thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase {ECO:0000255|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000255|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000255|HAMAP-Rule:MF_00165}; TaxID=167879 species="Bacteria; Proteobacteria; Gamm
Thymidylate kinase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=KTHY_COLP3
BD02T64_scaffold_1314_12
unknown

Not on your lists

comp(12904..15006)
DNA (2103bp) protein (701aa)

This feature has no annotations

BD02T64_scaffold_1314_13
unknown

Not on your lists

comp(15006..15203)
DNA (198bp) protein (66aa)

This feature has no annotations

BD02T64_scaffold_1314_14
Photorhabdus luminescens, Photorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15181..19296)
DNA (4116bp) protein (1372aa)
Uncharacterized protein n=1 Tax=Pseudomonas taiwanensis SJ9 RepID=V7D5A6_9PSED rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM27441.1}; TaxID=29488 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Photorhabdus.;" source="Photorhabdus l
hypothetical protein
BD02T64_scaffold_1314_15
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19392..20171)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Vibrio parahaemolyticus NIHCB0757 RepID=T5IQ25_VIBPH rbh
hypothetical protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
BD02T64_scaffold_1314_16
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(20222..20566)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q0P2_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:CAJ73560.1}; TaxID=174633 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="C
BD02T64_scaffold_1314_17
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20648..21463)
DNA (816bp) protein (272aa)
Uncharacterized protein n=2 Tax=Acinetobacter baumannii RepID=N8Z4L4_ACIBA
Uncharacterized protein {ECO:0000313|EMBL:ENW52282.1}; TaxID=1217637 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/
hypothetical protein
BD02T64_scaffold_1314_18
unknown

Not on your lists

comp(21536..21763)
DNA (228bp) protein (76aa)

This feature has no annotations

BD02T64_scaffold_1314_19
Serratia fonticola, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21905..22879)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Serratia fonticola AU-P3(3) RepID=U2NHE6_SERFO rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK10914.1}; TaxID=1332070 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia fontico
phage-like protein
BD02T64_scaffold_1314_20
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23099..24226
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Pseudomonas sp. PAMC 26793 RepID=UPI000315EAFC rbh
Nucleotide-binding protein, TIR-like protein {ECO:0000313|EMBL:KGJ95188.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Col
Hypothetical protein
BD02T64_scaffold_1314_21
Vibrio sp. JCM 18904, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24508..25008)
DNA (501bp) protein (167aa)
Uncharacterized protein {ECO:0000313|EMBL:GAJ72457.1}; TaxID=1298599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. JCM 18904.;"
BD02T64_scaffold_1314_22
unknown

Not on your lists

comp(25118..25507)
DNA (390bp) protein (130aa)

This feature has no annotations

BD02T64_scaffold_1314_23
unknown

Not on your lists

26473..27432
DNA (960bp) protein (320aa)

This feature has no annotations

BD02T64_scaffold_1314_24
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27676..28857)
DNA (1182bp) protein (394aa)
Putative uncharacterized protein n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DBQ9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EGV51922.1}; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (ve
hypothetical protein
BD02T64_scaffold_1314_25
Aeromonas salmonicida, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29110..29991)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Aeromonas hydrophila RepID=UPI000373568C
AAA ATPase {ECO:0000313|EMBL:EQC02764.1}; TaxID=1324960 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas salmonicida subsp. pectino
ATPase AAA
Displaying 25 items

View Taxonomy