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BD02T64_scaffold_1373

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1373_1
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(377..916)
DNA (540bp) protein (180aa)
Putative outer membrane phospholipase A n=1 Tax=Photobacterium profundum RepID=Q6LSL4_PHOPR
Phospholipase {ECO:0000313|EMBL:KJE39390.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actiniarum.;"
outer membrane phospholipase A precursor
BD02T64_scaffold_1373_2
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(916..1788)
DNA (873bp) protein (291aa)
Arginyl-tRNA synthetase n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DB79_9GAMM
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EGV52102.1}; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pa
methyl-accepting chemotaxis sensory transducer
BD02T64_scaffold_1373_3
Pseudomonas sp. G5(2012), Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1830..2456)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. G5(2012) RepID=S2FL20_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EPA95347.1}; TaxID=1268068 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. G
BD02T64_scaffold_1373_4
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2505..2684)
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Algicola sagamiensis RepID=UPI000373F243
Toluene tolerance protein {ECO:0000313|EMBL:KJE41844.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas vir
toluene tolerance family protein
BD02T64_scaffold_1373_5
unknown

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comp(2983..3210)
DNA (228bp) protein (76aa)

This feature has no annotations

BD02T64_scaffold_1373_6
CG_Proteo_01, Proteobacteria, Bacteria

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comp(3249..4202)
DNA (954bp) protein (318aa)
Putative patatin-like phospholipase n=1 Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0IRT0_LEPFC rbh
hypothetical protein; K07001 NTE family protein Tax=CG_Proteo_01
patatin-like phospholipase
BD02T64_scaffold_1373_7
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4224..7466)
DNA (3243bp) protein (1081aa)
Acriflavin resistance protein n=1 Tax=Cycloclasticus sp. PY97M RepID=S2UGC0_9GAMM
Cation/multidrug efflux pump
Cation/multidrug efflux pump {ECO:0000313|EMBL:AGS40333.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cyclocla
BD02T64_scaffold_1373_8
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7459..8550)
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Cycloclasticus pugetii RepID=UPI0003762FCC
Membrane-fusion protein
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AFT66621.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" so
BD02T64_scaffold_1373_9
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8543..9271)
DNA (729bp) protein (243aa)
TetR family transcriptional regulator n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AHM3_9PROT rbh
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:BAN34024.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sul
BD02T64_scaffold_1373_10
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9665..10579)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00037BFDF5 rbh
qbdB2; hypothetical protein
Conserved hypothetical secreted protein {ECO:0000313|EMBL:CAL95461.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp
BD02T64_scaffold_1373_11
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10678..12084)
DNA (1407bp) protein (469aa)
Aldehyde dehydrogenase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HP82_PARL1
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:ABS61715.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivora
BD02T64_scaffold_1373_12
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12606..13502)
DNA (897bp) protein (299aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Burkholderia sp. BT03 RepID=J3BYK0_9BURK rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:EIM99758.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bur
helix-turn-helix domain protein
BD02T64_scaffold_1373_13
gamma proteobacterium HIMB55, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13611..15287)
DNA (1677bp) protein (559aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=gamma proteobacterium HIMB55 RepID=H3NX93_9GAMM
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EHQ57769.1}; TaxID=745014 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma proteoba
AMP-dependent synthetase and ligase
BD02T64_scaffold_1373_14
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15478..16482)
DNA (1005bp) protein (335aa)
Transcriptional regulator, AraC family n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480T9_COLP3
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AAZ24466.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwelli
BD02T64_scaffold_1373_15
Marinobacter sp. BSs20148, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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16744..17208
DNA (465bp) protein (155aa)
acetyl-CoA acetyltransferase n=1 Tax=Amphritea japonica RepID=UPI0003689384
acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AFP31510.1}; TaxID=490759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter
BD02T64_scaffold_1373_16
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17301..18458
DNA (1158bp) protein (386aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:KGJ88664.1}; EC=1.3.8.1 {ECO:0000313|EMBL:KGJ88664.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae;
acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480T8_COLP3
BD02T64_scaffold_1373_17
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18473..18643
DNA (171bp) protein (57aa)
3-hydroxy-2-methylbutyryl-CoA dehydrogenase {ECO:0000313|EMBL:KGJ88665.1}; EC=1.1.1.178 {ECO:0000313|EMBL:KGJ88665.1};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonada
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q480T7_COLP3
3-hydroxyacyl-CoA dehydrogenase
BD02T64_scaffold_1373_18
RLO_Pseudomonas_59_9, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19459..20490
DNA (1032bp) protein (344aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Pseudomonas sp. GM18 RepID=J2NKB6_9PSED
AraC family transcriptional regulator Tax=RifCSPlowO2_12_Pseudomonas_59_9_curated
putative transcriptional regulator
BD02T64_scaffold_1373_19

Not on your lists

comp(21023..21343)
DNA (321bp) protein (107aa)
Glycoside hydrolase, family 3 domain protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LZV2_CLOB8
Uncharacterized protein {ECO:0000313|EMBL:KKN18423.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
glycoside hydrolase family 3 protein
BD02T64_scaffold_1373_20
Glaciecola punicea, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21632..22126)
DNA (495bp) protein (165aa)
ISPpu13, transposase Orf2 n=1 Tax=Glaciecola punicea DSM 14233 = ACAM 611 RepID=H5TD38_9ALTE
ISPpu13, transposase Orf2 {ECO:0000313|EMBL:GAB56215.1}; TaxID=1121923 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola punic
transposase IS66
BD02T64_scaffold_1373_21
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22280..23047)
DNA (768bp) protein (256aa)
IclR family transcriptional regulator n=1 Tax=Colwellia piezophila RepID=UPI0003820EFE rbh
IclR family transcriptional regulator rbh
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AAZ25638.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwelli
BD02T64_scaffold_1373_22
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23225..24721)
DNA (1497bp) protein (499aa)
mmsA2; methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27)
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:AAZ24282.1}; EC=1.2.1.27 {ECO:0000313|EMBL:AAZ24282.1};; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadale
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q485U0_COLP3
BD02T64_scaffold_1373_23
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24765..25925)
DNA (1161bp) protein (387aa)
alcohol dehydrogenase n=1 Tax=Colwellia piezophila RepID=UPI00037F600C rbh
alcohol dehydrogenase
Alcohol dehydrogenase, iron-containing {ECO:0000313|EMBL:AAZ26879.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwelli
BD02T64_scaffold_1373_24
Marinomonas posidonica, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25999..26868)
DNA (870bp) protein (290aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Marinomonas posidonica (strain CECT 7376 / NCIMB 14433 / IVIA-Po-181) RepID=F6D0X2_MARPP
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AEF53695.1}; TaxID=491952 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas posidonica (stra
BD02T64_scaffold_1373_25
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26900..28168)
DNA (1269bp) protein (423aa)
CAIB/BAIF family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q485U3_COLP3
CAIB/BAIF family protein
CAIB/BAIF family protein {ECO:0000313|EMBL:AAZ24803.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythr
Displaying 25 items

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