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BD02T64_scaffold_1395

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1395_1
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(33..173)
DNA (141bp) protein (47aa)
Uncharacterized protein {ECO:0000313|EMBL:EAR02048.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter.;" source="Maribacter sp. (strain
BD02T64_scaffold_1395_2
Siansivirga zeaxanthinifaciens, Siansivirga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(244..876)
DNA (633bp) protein (211aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KPR0_9FLAO
Crp/Fnr family transcriptional regulator
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:AJR04421.1}; TaxID=1454006 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Siansivirga.;" source="Sian
BD02T64_scaffold_1395_3
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1010..2203
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI00035FCDEF
Uncharacterized protein {ECO:0000313|EMBL:KGL62136.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel
hypothetical protein
BD02T64_scaffold_1395_4
Nematostella vectensis, Nematostella, Actiniaria, Hexacorallia, Cnidaria, Metazoa

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2238..3107
DNA (870bp) protein (290aa)
Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7T6P2_NEMVE
Predicted protein {ECO:0000313|EMBL:EDO28360.1}; Flags: Fragment;; TaxID=45351 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella.;" source="Nematost
palmitoyl-CoA hydrolase
BD02T64_scaffold_1395_5
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3109..3459
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Polaribacter sp. MED152 RepID=A2TXB8_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAQ43150.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. MED1
BD02T64_scaffold_1395_6
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3456..5912)
DNA (2457bp) protein (819aa)
TonB dependent/ligand-gated channel n=1 Tax=Polaribacter sp. MED152 RepID=A2TXC5_9FLAO
TonB-dependent receptor, plug {ECO:0000313|EMBL:KGL59324.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter s
TonB dependent/ligand-gated channel
BD02T64_scaffold_1395_7
Polaribacter irgensii, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5912..6634)
DNA (723bp) protein (241aa)
DNA repair protein RecO n=1 Tax=Polaribacter irgensii 23-P RepID=A4BXZ7_9FLAO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=313594 species="Bacteria; Bacteroidetes; Flav
recO; recombination protein O
BD02T64_scaffold_1395_8
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6634..8955)
DNA (2322bp) protein (774aa)
Putative uncharacterized protein n=1 Tax=uncultured Flavobacteriia bacterium RepID=H6RI39_9BACT
Putative surface protein {ECO:0000313|EMBL:KGL62141.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. He
hypothetical protein
BD02T64_scaffold_1395_9
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9048..9521
DNA (474bp) protein (158aa)
Protein containing CYTH domain n=1 Tax=uncultured Flavobacteriia bacterium RepID=H6RI40_9BACT
Adenylate cyclase family protein {ECO:0000313|EMBL:KGL59321.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacte
adenylate cyclase family protein
BD02T64_scaffold_1395_10
Flavobacteria bacterium MS024-2A, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9864..10502)
DNA (639bp) protein (213aa)
hemolysin D n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI000382E451
Channel protein, hemolysin III family {ECO:0000313|EMBL:EEG41971.1}; TaxID=487796 species="Bacteria; Bacteroidetes; Flavobacteriia.;" source="Flavobacteria bacterium (strain MS024-2A).;"
hemolysin-III related protein
BD02T64_scaffold_1395_11
Polaribacter irgensii, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10499..11266)
DNA (768bp) protein (256aa)
Acyltransferase n=1 Tax=Polaribacter irgensii 23-P RepID=A4BXZ3_9FLAO rbh
Acyltransferase {ECO:0000313|EMBL:EAR13834.1}; TaxID=313594 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter irgensii 23-P.;"
acyltransferase
BD02T64_scaffold_1395_12
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11459..12427
DNA (969bp) protein (323aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:EAQ43142.1}; EC=6.1.1.2 {ECO:0000313|EMBL:EAQ43142.1};; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriacea
Tryptophanyl-tRNA synthetase n=1 Tax=Polaribacter sp. MED152 RepID=A2TXC8_9FLAO
BD02T64_scaffold_1395_13
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12468..13505)
DNA (1038bp) protein (346aa)
aldo/keto reductase n=1 Tax=Polaribacter franzmannii RepID=UPI0003766D5C
Aldo/keto reductase {ECO:0000313|EMBL:KGL60226.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_33
aldo/keto reductase family protein
BD02T64_scaffold_1395_14
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13515..14702)
DNA (1188bp) protein (396aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1121898 species="Bacteria;
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M6J2_GRAFK
BD02T64_scaffold_1395_15
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14810..15967
DNA (1158bp) protein (386aa)
DNA polymerase III subunit delta {ECO:0000313|EMBL:KGL62232.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KGL62232.1};; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacter
holB; DNA polymerase III, delta' subunit (EC:2.7.7.7)
DNA polymerase III, delta' subunit n=1 Tax=Polaribacter sp. MED152 RepID=A2TY33_9FLAO
BD02T64_scaffold_1395_16
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15957..18563)
DNA (2607bp) protein (869aa)
Putative outer membrane protein probably involved in nutrient binding n=1 Tax=Kordia algicida OT-1 RepID=A9DRV9_9FLAO
Putative outer membrane protein probably involved in nutrient binding {ECO:0000313|EMBL:EDP96850.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae;
TonB-dependent receptor plug
BD02T64_scaffold_1395_17
Flavobacteriales bacterium ALC-1, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18566..19474)
DNA (909bp) protein (303aa)
Possible anti-sigma factor n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UQ09_9FLAO rbh
Possible anti-sigma factor {ECO:0000313|EMBL:EDP69528.1}; TaxID=391603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium ALC-1.;"
hypothetical protein
BD02T64_scaffold_1395_18
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19537..20046)
DNA (510bp) protein (170aa)
Putative RNA polymerase ECF-type sigma factor n=1 Tax=Kordia algicida OT-1 RepID=A9DRV4_9FLAO
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EDP96848.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordi
RNA polymerase ECF-type sigma factor
BD02T64_scaffold_1395_19
unknown

Not on your lists

20159..21157
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI00036416AB rbh
BD02T64_scaffold_1395_20
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21282..21680
DNA (399bp) protein (133aa)
DoxX family protein n=1 Tax=Polaribacter sp. MED152 RepID=A2TYA5_9FLAO
Conserved hypothetical membrane protein {ECO:0000313|EMBL:KGL60111.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Pola
DoxX family protein
BD02T64_scaffold_1395_21
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21837..22694)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI0003643749
SAM-dependent methyltransferase {ECO:0000313|EMBL:KGL62410.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter
hypothetical protein
BD02T64_scaffold_1395_22
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22738..24615)
DNA (1878bp) protein (626aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Polaribacter sp. MED152 RepID=A2TYB2_9FLAO
gidA; glucose inhibited division protein A Tax=CG_Flavo_02
gidA; glucose inhibited division protein A
BD02T64_scaffold_1395_23
Siansivirga zeaxanthinifaciens, Siansivirga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24659..25072)
DNA (414bp) protein (138aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=1454006 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriac
Endoribonuclease YbeY n=1 Tax=Polaribacter sp. MED152 RepID=A2TYB1_9FLAO
rRNA maturation factor
BD02T64_scaffold_1395_24
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25065..28367)
DNA (3303bp) protein (1101aa)
Uncharacterized protein n=1 Tax=Polaribacter sp. MED152 RepID=A2TYB0_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAQ42811.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. MED1
BD02T64_scaffold_1395_25
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28480..28563
DNA (84bp) protein (28aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=655815 species="Bacteria; Ba
Displaying 25 items

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