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BD02T64_scaffold_1409

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1409_1
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..387)
DNA (387bp) protein (129aa)
Amino acid/peptide transporter subfamily protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYH4_9GAMM
Amino acid/peptide transporter subfamily protein {ECO:0000313|EMBL:EEB78578.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma prote
amino acid/peptide transporter
BD02T64_scaffold_1409_2
Reinekea blandensis, Reinekea, Gammaproteobacteria, Proteobacteria, Bacteria

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632..2314
DNA (1683bp) protein (561aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Reinekea blandensis MED297 RepID=A4BJQ3_9GAMM
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EAR07628.1}; TaxID=314283 species="Bacteria; Proteobacteria; Gammaproteobacteria; Reinekea.;" source="Reinekea blandensis MED297.
acyl-CoA synthetase
BD02T64_scaffold_1409_3
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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2318..6193
DNA (3876bp) protein (1292aa)
RNA helicase n=1 Tax=Microbulbifer agarilyticus RepID=UPI0002558339 rbh
ATP-dependent helicase HrpA {ECO:0000313|EMBL:KJS04153.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hrpA; ATP-dependent helicase HrpA rbh
BD02T64_scaffold_1409_4
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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6356..6829
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BK42_NEPCE rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR60848.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter caesariensis.;"
hypothetical protein
BD02T64_scaffold_1409_5
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

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6853..7737
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI00037F3F98 rbh
UPF0276 protein U062_00409 {ECO:0000256|HAMAP-Rule:MF_00697}; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MOLA455.;"
hypothetical protein
BD02T64_scaffold_1409_6
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

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7727..8470
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI0003701042 rbh
Uncharacterized protein {ECO:0000313|EMBL:EAS47685.1}; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" source="gamma proteobacterium HTCC2207.;"
hypothetical protein
BD02T64_scaffold_1409_7
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8583..9791)
DNA (1209bp) protein (403aa)
Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RUR2_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EEB79627.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2
hypothetical protein
BD02T64_scaffold_1409_8
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10114..10815
DNA (702bp) protein (234aa)
VacJ family lipoprotein n=1 Tax=Pseudomonas mendocina (strain ymp) RepID=A4XTM3_PSEMY rbh
VacJ family lipoprotein
VacJ family lipoprotein {ECO:0000313|EMBL:ABP84689.1}; Flags: Precursor;; TaxID=399739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source=
BD02T64_scaffold_1409_9

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10915..12090
DNA (1176bp) protein (392aa)
Response regulator n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YT04_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KKL24407.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
response regulator
BD02T64_scaffold_1409_10
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

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12091..12576
DNA (486bp) protein (162aa)
Anti-anti-sigma factor n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YT05_9GAMM rbh
Anti-anti-sigma factor {ECO:0000313|EMBL:ETN92530.1}; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MOLA455.;"
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
BD02T64_scaffold_1409_11

Not on your lists

comp(12591..13055)
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KDG1_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO10489.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
protein of unknown function DUF1332
BD02T64_scaffold_1409_12
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13052..14008)
DNA (957bp) protein (319aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155};; TaxID=247633 species="Bacteria; Proteobact
tal; transaldolase B (EC:2.2.1.2)
Transaldolase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YCR9_9GAMM rbh
BD02T64_scaffold_1409_13
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14026..15060)
DNA (1035bp) protein (345aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteoba
tRNA dihydrouridine synthase A (EC:1.-.-.-)
tRNA-dihydrouridine synthase n=2 Tax=Edwardsiella tarda RepID=D0Z9Z1_EDWTE rbh
BD02T64_scaffold_1409_14

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15161..17323
DNA (2163bp) protein (721aa)
ABC transporter n=1 Tax=Marinobacterium stanieri RepID=UPI0002559C4E
Uncharacterized protein {ECO:0000313|EMBL:KKL50055.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ABC transporter, transmembrane region:ABC transporter:Peptidase C39, bacteriocin processing
BD02T64_scaffold_1409_15
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

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17323..18687
DNA (1365bp) protein (455aa)
HlyD family secretion protein n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KPP6_SIMAS rbh
HlyD family secretion protein rbh
HlyD family secretion protein {ECO:0000313|EMBL:AFV01027.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 / JCM 1388
BD02T64_scaffold_1409_16
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

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19010..20311
DNA (1302bp) protein (434aa)
Poly(R)-hydroxyalkanoic acid synthase, class I n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4L487_SIMAS rbh
Poly(R)-hydroxyalkanoic acid synthase, class I
Poly(R)-hydroxyalkanoic acid synthase, class I {ECO:0000313|EMBL:AFV01028.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM
BD02T64_scaffold_1409_17
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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20376..24380
DNA (4005bp) protein (1335aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2L6R5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPC03469.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticarie
hypothetical protein
BD02T64_scaffold_1409_18
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24450..25121)
DNA (672bp) protein (224aa)
Predicted periplasmic protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B0Q9_9PROT rbh
predicted periplasmic protein
Predicted periplasmic protein {ECO:0000313|EMBL:BAN34267.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricell
BD02T64_scaffold_1409_19
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25302..27266
DNA (1965bp) protein (655aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KLX8_SIMAS rbh
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:AFU99088.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 /
BD02T64_scaffold_1409_20
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27347..28327
DNA (981bp) protein (327aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1629722 species="Bacteria; P
glutamyl-tRNA synthetase n=1 Tax=Moraxella boevrei RepID=UPI00037FFB72
glutamyl-tRNA synthetase
Displaying 20 items

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