ggKbase home page

BD02T64_scaffold_1477

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1477_1
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..693
DNA (693bp) protein (231aa)
Aldehyde dehydrogenase family protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q484A0_COLP3
aldehyde dehydrogenase
Aldehyde dehydrogenase family protein {ECO:0000313|EMBL:AAZ26980.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
BD02T64_scaffold_1477_2
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

755..2890
DNA (2136bp) protein (712aa)
Putative regulatory protein NosR n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q484A1_COLP3
Nitrous oxide expression regulator, NosR {ECO:0000313|EMBL:KGJ94177.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia
regulatory protein NosR
BD02T64_scaffold_1477_3
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3174..4340
DNA (1167bp) protein (389aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q484A2_COLP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ28088.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_1477_4
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4333..6882
DNA (2550bp) protein (850aa)
Sensory box sensor histidine kinase/response regulator n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q484A3_COLP3
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:KGJ94175.1}; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia
sensory box sensor histidine kinase/response regulator
BD02T64_scaffold_1477_5
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7091..9403
DNA (2313bp) protein (771aa)
TonB-dependent receptor n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483W0_COLP3
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AAZ26008.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythra
BD02T64_scaffold_1477_6
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9477..10535
DNA (1059bp) protein (353aa)
Putative sulfonate ABC transporter, periplasmic sulfonate-binding protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483V8_COLP3
sulfonate ABC transporter periplasmic sulfonate-binding protein
Putative sulfonate ABC transporter, periplasmic sulfonate-binding protein {ECO:0000313|EMBL:AAZ27514.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwellia
BD02T64_scaffold_1477_7
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10601..11365
DNA (765bp) protein (255aa)
Putative sulfonate ABC transporter, permease protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483V7_COLP3
sulfonate ABC transporter permease
Putative sulfonate ABC transporter, permease protein {ECO:0000313|EMBL:AAZ25900.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" so
BD02T64_scaffold_1477_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11352..12131
DNA (780bp) protein (260aa)
Putative sulfonate ABC transporter, ATP-binding protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483V6_COLP3
sulfonate ABC transporter ATP-binding protein
Putative sulfonate ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AAZ24776.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;"
BD02T64_scaffold_1477_9
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12539..13690
DNA (1152bp) protein (384aa)
Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483V5_COLP3
Uncharacterized protein {ECO:0000313|EMBL:KGJ87547.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwe
hypothetical protein
BD02T64_scaffold_1477_10
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13901..14557
DNA (657bp) protein (219aa)
DNA-binding response regulator n=1 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q483V4_COLP3
DNA-binding response regulator
DNA-binding response regulator {ECO:0000313|EMBL:AAZ23990.1}; TaxID=167879 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychr
BD02T64_scaffold_1477_11
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

14954..15970
DNA (1017bp) protein (339aa)
alcohol dehydrogenase (EC:1.6.5.5)
Alcohol dehydrogenase, zinc-binding domain protein {ECO:0000313|EMBL:ACC81054.1}; EC=1.6.5.5 {ECO:0000313|EMBL:ACC81054.1};; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nost
Alcohol dehydrogenase, zinc-binding domain protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J9M7_NOSP7
BD02T64_scaffold_1477_12
Vibrio shilonii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16533..18239
DNA (1707bp) protein (569aa)
Possible recombinase n=1 Tax=Vibrio shilonii AK1 RepID=A6D144_9VIBR rbh
Possible recombinase {ECO:0000313|EMBL:EDL53748.1}; TaxID=391591 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio shilonii AK1.;"
hypothetical protein
BD02T64_scaffold_1477_13
unknown

Not on your lists

comp(18304..18882)
DNA (579bp) protein (193aa)

This feature has no annotations

BD02T64_scaffold_1477_14
Shewanella putrefaciens, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18991..19596)
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Shewanella putrefaciens (strain 200) RepID=E6XSA7_SHEP2 rbh
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADV56115.1}; TaxID=399804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella p
BD02T64_scaffold_1477_15
Paenibacillus sp. FSL H8-237, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19696..20463)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Vibrio cholerae MZO-2 RepID=A6A511_VIBCL rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETT53909.1}; TaxID=1227350 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H8-237.;"
BD02T64_scaffold_1477_16
Idiomarina sp. MCCC 1A10513, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20570..21322)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ7 RepID=UPI000374E285 rbh
Abortive phage resistance protein {ECO:0000313|EMBL:KFZ28382.1}; TaxID=1517416 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina
hypothetical protein
BD02T64_scaffold_1477_17

Not on your lists

comp(21454..22023)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Xanthomonas fuscans subsp. fuscans RepID=U4M224_9XANT rbh
hypothetical protein
Marine sediment metagenome DNA, contig: S06H3_S00489 {ECO:0000313|EMBL:GAI25840.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
BD02T64_scaffold_1477_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22147..22614)
DNA (468bp) protein (156aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
BD02T64_scaffold_1477_19
Paraglaciecola arctica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22988..23203)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Glaciecola arctica BSs20135 RepID=K6XI63_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:GAC20314.1}; TaxID=493475 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
hypothetical protein
BD02T64_scaffold_1477_20
unknown

Not on your lists

23594..23842
DNA (249bp) protein (83aa)

This feature has no annotations

BD02T64_scaffold_1477_21
unknown

Not on your lists

23874..24062
DNA (189bp) protein (63aa)

This feature has no annotations

BD02T64_scaffold_1477_22
unknown

Not on your lists

24031..24432
DNA (402bp) protein (134aa)

This feature has no annotations

BD02T64_scaffold_1477_23
unknown

Not on your lists

25045..25305
DNA (261bp) protein (87aa)

This feature has no annotations

BD02T64_scaffold_1477_24
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

25341..25580
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:EFS26396.1}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
BD02T64_scaffold_1477_25
unknown

Not on your lists

25606..25755
DNA (150bp) protein (50aa)

This feature has no annotations

BD02T64_scaffold_1477_26
unknown

Not on your lists

comp(25995..26468)
DNA (474bp) protein (158aa)

This feature has no annotations

BD02T64_scaffold_1477_27
unknown

Not on your lists

comp(26512..26691)
DNA (180bp) protein (60aa)

This feature has no annotations

BD02T64_scaffold_1477_28
Synechococcus phage ACG-2014f, T4likevirus, Caudovirales, Viruses

Not on your lists

27490..27846
DNA (357bp) protein (119aa)
Uncharacterized HNH endonuclease L245 n=5 Tax=Mimiviridae RepID=YL245_MIMIV rbh
helix-turn-helix domain of resolvase family protein
Endonuclease {ECO:0000313|EMBL:AIX30870.1}; TaxID=1493511 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Synechococcus phage ACG-2014f.;"
Displaying 28 items

View Taxonomy