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BD02T64_scaffold_1550

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1550_1
Marinomonas profundimaris, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

445..792
DNA (348bp) protein (116aa)
UPI0003D5CD95 related cluster n=1 Tax=unknown RepID=UPI0003D5CD95 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETI61305.1}; TaxID=1208321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas profundimaris.;"
BD02T64_scaffold_1550_2
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(990..1313)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. CF444 RepID=J2LEB9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KFE54869.1}; TaxID=317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringae.
NIPSNAP family containing protein
BD02T64_scaffold_1550_3
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1368..2162)
DNA (795bp) protein (265aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KEA64462.1}; EC=5.1.3.2 {ECO:0000313|EMBL:KEA64462.1};; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadacea
NAD-dependent epimerase/dehydratase n=1 Tax=Osedax symbiont Rs1 RepID=S6HCC6_9GAMM
NAD-dependent epimerase/dehydratase
BD02T64_scaffold_1550_4
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2177..3136)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JWA9_9PROT rbh
Dihydrodipicolinate synthetase family protein {ECO:0000313|EMBL:KCB38251.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source=
hypothetical protein
BD02T64_scaffold_1550_5
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3433..4440
DNA (1008bp) protein (336aa)
UPI0003D1AA9F related cluster n=1 Tax=unknown RepID=UPI0003D1AA9F rbh
Contig10, whole genome shotgun sequence {ECO:0000313|EMBL:ETA50071.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacterace
dctP; TRAP dicarboxylate ABC transporter substrate-binding protein
BD02T64_scaffold_1550_6
Agarivorans albus, Agarivorans, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4518..5042
DNA (525bp) protein (175aa)
TRAP-type transport system n=1 Tax=Agarivorans albus MKT 106 RepID=R9PMI6_AGAAL rbh
TRAP-type transport system {ECO:0000313|EMBL:GAD02579.1}; TaxID=1331007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Agarivorans.;" source="Agarivorans al
TRAP C4-dicarboxylate transport system subunit DctQ
BD02T64_scaffold_1550_7
Agarivorans albus, Agarivorans, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5056..6339
DNA (1284bp) protein (428aa)
TRAP-type C4-dicarboxylate transport system n=1 Tax=Agarivorans albus MKT 106 RepID=R9PMS6_AGAAL rbh
TRAP-type C4-dicarboxylate transport system {ECO:0000313|EMBL:GAD02578.1}; TaxID=1331007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Agarivorans.;" sourc
dctM; TRAP dicarboxylate transporter subunit DctM
BD02T64_scaffold_1550_8
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6344..7063
DNA (720bp) protein (240aa)
GntR family transcriptional regulator n=1 Tax=Leucothrix mucor RepID=UPI0003B40802
GntR family transcriptional regulator {ECO:0000313|EMBL:KJE34330.1}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source=
Transcriptional regulator
BD02T64_scaffold_1550_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7274..8035
DNA (762bp) protein (254aa)
Enoyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:KFC70113.1}; EC=1.3.1.9 {ECO:0000313|EMBL:KFC70113.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brad
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D98857 rbh
short-chain dehydrogenase/reductase SDR
BD02T64_scaffold_1550_10
Pseudovibrio sp. JE062, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8136..9092
DNA (957bp) protein (319aa)
2-dehydro-3-deoxygluconokinase {ECO:0000313|EMBL:EEA94808.1}; EC=2.7.1.45 {ECO:0000313|EMBL:EEA94808.1};; TaxID=439495 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobac
2-dehydro-3-deoxygluconokinase n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R320_9RHOB rbh
kdgK; 2-dehydro-3-deoxygluconokinase rbh
BD02T64_scaffold_1550_11
Marinomonas profundimaris, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9212..10072
DNA (861bp) protein (287aa)
UPI0003D64BA9 related cluster n=1 Tax=unknown RepID=UPI0003D64BA9
Amidohydrolase {ECO:0000313|EMBL:ETI59180.1}; TaxID=1208321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas profundimaris.;"
amidohydrolase 2
BD02T64_scaffold_1550_12
Shewanella sediminis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10639..11643
DNA (1005bp) protein (335aa)
sugar ABC transporter ATPase n=1 Tax=Psychromonas hadalis RepID=UPI0003B62815
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV38896.1}; Flags: Precursor;; TaxID=425104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Sh
BD02T64_scaffold_1550_13
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12760..14400
DNA (1641bp) protein (547aa)
Putative methyl-accepting chemotaxis sensory transducer n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KKA7_SIMAS rbh
Chemotaxis protein {ECO:0000313|EMBL:AKH20452.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
putative methyl-accepting chemotaxis sensory transducer
BD02T64_scaffold_1550_14
Reinekea blandensis, Reinekea, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14930..16864)
DNA (1935bp) protein (645aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=314283 species="Bacteria; Proteobacteria; Gammaproteobacteria; Reinekea.;" source="Reinekea blande
putative Histidine kinase (EC:2.7.13.3)
Two-component sensor histidine kinase protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BF93_9GAMM rbh
BD02T64_scaffold_1550_15
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16884..17855)
DNA (972bp) protein (324aa)
Monosaccharide-transporting ATPase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1ID23_9CHLR
Sugar ABC transporter ATPase {ECO:0000313|EMBL:AKH22375.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
periplasmic binding protein/LacI transcriptional regulator
BD02T64_scaffold_1550_16
Mariprofundus ferrooxydans, Mariprofundus, Mariprofundales, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18130..18921
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Psychromonas ossibalaenae RepID=UPI000362077B
Hypothetical ribonuclease HI {ECO:0000313|EMBL:EAU55841.1}; TaxID=314345 species="Bacteria; Proteobacteria; Zetaproteobacteria; Mariprofundales; Mariprofundaceae; Mariprofundus.;" source="Mariprofundu
ribonuclease H
BD02T64_scaffold_1550_17
Osedax symbiont Rs1, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19308..19841)
DNA (534bp) protein (178aa)
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Osedax symbiont Rs1 RepID=S6GEZ6_9GAMM rbh
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EPJ45451.1}; TaxID=1330036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source
BD02T64_scaffold_1550_18
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20244..21005)
DNA (762bp) protein (254aa)
ABC transporter, ATP-binding protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GCD5_9GAMM rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EPJ43126.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="
livF; High-affinity branched-chain amino acid transport ATP-binding protein LivF (LIV-I protein F)
BD02T64_scaffold_1550_19
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21002..21766)
DNA (765bp) protein (255aa)
ABC transporter ATP-binding protein n=1 Tax=Osedax symbiont Rs2 RepID=S6HDT1_9GAMM rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EPJ43127.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="O
branched-chain amino acid ABC transporter substrate-binding protein
BD02T64_scaffold_1550_20
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21756..22877)
DNA (1122bp) protein (374aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Osedax symbiont Rs2 RepID=S6H629_9GAMM rbh
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EPJ43128.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillace
ABC transporter permease
BD02T64_scaffold_1550_21
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22912..23943)
DNA (1032bp) protein (344aa)
Inner-membrane translocator n=1 Tax=Osedax symbiont Rs2 RepID=S6GFD7_9GAMM rbh
Inner-membrane translocator {ECO:0000313|EMBL:EPJ43129.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax sy
Membrane spanning protein
BD02T64_scaffold_1550_22
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24394..25746)
DNA (1353bp) protein (451aa)
Twin-arginine translocation pathway signal n=1 Tax=Osedax symbiont Rs2 RepID=S6HDT6_9GAMM rbh
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:EPJ43132.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" so
branched chain amino acid ABC transporter substrate-binding protein
Displaying 22 items

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