ggKbase home page

BD02T64_scaffold_1617

Search features with annotation key words

Displaying 27 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1617_1
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3..749)
DNA (747bp) protein (249aa)
lon; ATP-dependent protease La (EC:3.4.21.53)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
Lon protease n=1 Tax=Polaribacter franzmannii RepID=UPI000375405C
BD02T64_scaffold_1617_2
Zhouia amylolytica, Zhouia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

996..1361
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G4F0_ECHVK
Uncharacterized protein {ECO:0000313|EMBL:ETN96950.1}; TaxID=1286632 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zhouia.;" source="Zhouia amylolytica AD3.;"
hypothetical protein
BD02T64_scaffold_1617_3
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1386..2162
DNA (777bp) protein (259aa)
LuxR-type transcriptional regulator n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L415_ZOBGA
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:KGL63923.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polar
LuxR family transcriptional regulator
BD02T64_scaffold_1617_4
Polaribacter irgensii, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2246..3265)
DNA (1020bp) protein (340aa)
Putative 6-aminohexanoate-dimer hydrolase n=1 Tax=Polaribacter irgensii 23-P RepID=A4C151_9FLAO rbh
Putative 6-aminohexanoate-dimer hydrolase {ECO:0000313|EMBL:EAR11854.1}; TaxID=313594 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Pol
hypothetical protein
BD02T64_scaffold_1617_5
Psychroflexus torquis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3832..4863
DNA (1032bp) protein (344aa)
Transpeptidase superfamily protein n=1 Tax=Psychroflexus torquis (strain ATCC 700755 / ACAM 623) RepID=K4ICG7_PSYTT
transpeptidase superfamily protein
Transpeptidase superfamily protein {ECO:0000313|EMBL:AFU68109.1}; TaxID=313595 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychroflexus.;" source="Psychrofl
BD02T64_scaffold_1617_6
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5064..6140
DNA (1077bp) protein (359aa)
D-cysteine desulfhydrase; K05396 D-cysteine desulfhydrase [EC:4.4.1.15] Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00036540A6
D-cysteine desulfhydrase
BD02T64_scaffold_1617_7
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

6148..7251
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI00037A0C6D
Aminotransferase class V {ECO:0000313|EMBL:EHO39939.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
class V aminotransferase
BD02T64_scaffold_1617_8
Psychroflexus torquis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7287..8030)
DNA (744bp) protein (248aa)
Transcriptional regulator, XRE_HTH superfamily n=1 Tax=Psychroflexus torquis (strain ATCC 700755 / ACAM 623) RepID=K4I9F8_PSYTT rbh
transcriptional regulator, XRE_HTH superfamily
Transcriptional regulator, XRE_HTH superfamily {ECO:0000313|EMBL:AFU67272.1}; TaxID=313595 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychroflexus.;" sourc
BD02T64_scaffold_1617_9
Polaribacter irgensii, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8324..8719
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Polaribacter irgensii 23-P RepID=A4BZG3_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR12556.1}; TaxID=313594 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter irgensii
bacterial sensory transduction regulator, YbjN superfamily
BD02T64_scaffold_1617_10
Polaribacter irgensii, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8747..9445
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Polaribacter irgensii 23-P RepID=A4BZG2_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR12555.1}; TaxID=313594 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter irgensii
phage shock protein A PspA
BD02T64_scaffold_1617_11
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9636..12332
DNA (2697bp) protein (899aa)
Uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZVK4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EAY25547.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
hypothetical protein
BD02T64_scaffold_1617_12
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12336..12779
DNA (444bp) protein (148aa)
hypothetical protein, partial n=1 Tax=Enterovibrio norvegicus RepID=UPI00036FFDD1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJQ92971.1}; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales; Gynuella.;" source="Gynu
BD02T64_scaffold_1617_13

Not on your lists

12786..13793
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PIL3_9ZZZZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EFK96602.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
BD02T64_scaffold_1617_14
Polaribacter irgensii, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13816..14367
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Polaribacter irgensii 23-P RepID=A4BZG1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EAR12554.1}; TaxID=313594 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter irgensii
hypothetical protein
BD02T64_scaffold_1617_15
Polaribacter irgensii, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14405..15202
DNA (798bp) protein (266aa)
Putative lipoprotein n=1 Tax=Polaribacter irgensii 23-P RepID=A4BZG0_9FLAO rbh
Putative lipoprotein {ECO:0000313|EMBL:EAR12553.1}; TaxID=313594 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter irgensii 23
hypothetical protein
BD02T64_scaffold_1617_16
Psychroflexus torquis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15226..16095
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Psychroflexus torquis (strain ATCC 700755 / ACAM 623) RepID=K4I9G4_PSYTT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU67277.1}; TaxID=313595 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychroflexus.;" source="Psychroflexus torqui
BD02T64_scaffold_1617_17
Polaribacter irgensii, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16083..17639
DNA (1557bp) protein (519aa)
Spermidine synthase n=1 Tax=Polaribacter irgensii 23-P RepID=A4BZF8_9FLAO rbh
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=31
spermidine synthase SpeE
BD02T64_scaffold_1617_18
Polaribacter irgensii, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17643..17954
DNA (312bp) protein (104aa)
Adenosylmethionine decarboxylase {ECO:0000256|SAAS:SAAS00093036}; EC=4.1.1.50 {ECO:0000256|SAAS:SAAS00093036};; TaxID=313594 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavoba
Spermidine synthase n=1 Tax=Polaribacter irgensii 23-P RepID=A4BZF7_9FLAO
S-adenosylmethionine decarboxylase SpeD
BD02T64_scaffold_1617_19
Polaribacter irgensii, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17991..18767
DNA (777bp) protein (259aa)
Cation channel family protein n=1 Tax=Polaribacter irgensii 23-P RepID=A4BZF6_9FLAO
Cation channel family protein {ECO:0000313|EMBL:EAR12549.1}; TaxID=313594 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter ir
potassium channel protein
BD02T64_scaffold_1617_20
Polaribacter irgensii, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18764..19330
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Polaribacter irgensii 23-P RepID=A4BZF5_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR12548.1}; TaxID=313594 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter irgensii
membrane protein, rhomboid superfamily
BD02T64_scaffold_1617_21
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19395..20000
DNA (606bp) protein (202aa)
RNA polymerase sigma-70 factor n=1 Tax=Polaribacter sp. MED152 RepID=A2U0Z1_9FLAO
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:KGL63298.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polarib
RNA polymerase sigma-70 factor
BD02T64_scaffold_1617_22
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20013..20546
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI0003804E07
Uncharacterized protein {ECO:0000313|EMBL:KGL60573.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel
hypothetical protein
BD02T64_scaffold_1617_23
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20527..21612
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI0003712FEC
Uncharacterized protein {ECO:0000313|EMBL:KGL63300.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel
hypothetical protein
BD02T64_scaffold_1617_24
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21638..22366
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U0Z3_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAQ41879.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. MED1
BD02T64_scaffold_1617_25
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22416..23591)
DNA (1176bp) protein (392aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:KGL63286.1}; EC=2.7.7.24 {ECO:0000313|EMBL:KGL63286.1};; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; F
glucose-1-phosphate thymidylyltransferase n=1 Tax=Polaribacter franzmannii RepID=UPI000363C35D
hexapeptide transferase family protein
BD02T64_scaffold_1617_26
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23719..24573)
DNA (855bp) protein (285aa)
Uncharacterized protein {ECO:0000313|EMBL:KJJ37939.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladiv
Uncharacterized protein id=2545724 bin=GWF1_Flavobacteria_32_7 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
hypothetical protein
BD02T64_scaffold_1617_27
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24636..25409)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U0Y6_9FLAO
Reeler domain protein-containing protein {ECO:0000313|EMBL:KGL63285.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Pol
hypothetical protein
Displaying 27 items

View Taxonomy