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BD02T64_scaffold_1681

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1681_1
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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469..1323
DNA (855bp) protein (285aa)
RpiR family regulatory protein 1 n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T581_ALCXX rbh
RpiR family regulatory protein 1 {ECO:0000313|EMBL:EGP44509.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromoba
RpiR family transcriptional regulator
BD02T64_scaffold_1681_2
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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1397..2473
DNA (1077bp) protein (359aa)
DctP7: predicted TRAP dicarboxylate transporter periplasmic binding protein n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NJ83_DESTT rbh
dctP7; TRAP dicarboxylate transporter periplasmic binding protein DctP7
Tax=BJP_IG2069_Syntrophobacterales_47_18
BD02T64_scaffold_1681_3
Desulfarculus sp. SPR, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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2545..3045
DNA (501bp) protein (167aa)
TRAP transporter component n=1 Tax=Lentibacillus jeotgali RepID=UPI00026283E9 rbh
Contig_19, whole genome shotgun sequence {ECO:0000313|EMBL:KIX14299.1}; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source
hypothetical protein
BD02T64_scaffold_1681_4
Desulfarculus sp. SPR, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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3120..4433
DNA (1314bp) protein (438aa)
DctM7: predicted TRAP dicarboxylate transport system permease n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NFM9_DESTT rbh
Contig_19, whole genome shotgun sequence {ECO:0000313|EMBL:KIX14298.1}; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source
dctM7; TRAP dicarboxylate transport system permease DctM7
BD02T64_scaffold_1681_5
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4464..5588
DNA (1125bp) protein (375aa)
dihydroorotase n=1 Tax=Rhizobium loti RepID=UPI00035F769B
Amidohydrolase family protein {ECO:0000313|EMBL:AID33419.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobiu
amidohydrolase
BD02T64_scaffold_1681_6
Providencia rustigianii, Providencia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5588..6694
DNA (1107bp) protein (369aa)
Tartrate dehydrogenase {ECO:0000313|EMBL:EFB71025.1}; EC=1.1.1.93 {ECO:0000313|EMBL:EFB71025.1};; TaxID=500637 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteria
Tartrate dehydrogenase n=1 Tax=Providencia rustigianii DSM 4541 RepID=D1P6I3_9ENTR rbh
tartrate dehydrogenase
BD02T64_scaffold_1681_7
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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6737..8203
DNA (1467bp) protein (489aa)
gabD2; succinate semialdehyde dehydrogenase (EC:1.2.1.16)
Probable succinate-semialdehyde dehydrogenase [NAD(P)+] {ECO:0000313|EMBL:CAL94537.1}; EC=1.2.1.16 {ECO:0000313|EMBL:CAL94537.1};; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rh
Probable succinate-semialdehyde dehydrogenase [NAD(P)+] n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K6T2_AZOSB
BD02T64_scaffold_1681_8
Marinomonas sp. MED121, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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8200..9336
DNA (1137bp) protein (379aa)
Putative threonine aldolase n=1 Tax=Marinomonas sp. MED121 RepID=A3YHZ5_9GAMM
Putative threonine aldolase {ECO:0000313|EMBL:EAQ63218.1}; TaxID=314277 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas sp. MED121.;"
alanine racemase domain-containing protein
BD02T64_scaffold_1681_9
Rhodobacteraceae bacterium KLH11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9625..10590
DNA (966bp) protein (322aa)
fatty acid desaturase n=1 Tax=Ruegeria conchae RepID=UPI000237AF4A rbh
Fatty acid desaturase {ECO:0000313|EMBL:EEE35658.1}; TaxID=467661 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium KLH11.
fatty acid desaturase
BD02T64_scaffold_1681_10
Rhodobacteraceae bacterium KLH11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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10587..10907
DNA (321bp) protein (107aa)
naphthalene 1,2-dioxygenase n=1 Tax=Ruegeria conchae RepID=UPI000237AF4B rbh
Rieske (2Fe-2S) protein {ECO:0000313|EMBL:EEE35985.1}; TaxID=467661 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium KLH1
Rieske (2Fe-2S) protein
BD02T64_scaffold_1681_11
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11301..12509)
DNA (1209bp) protein (403aa)
Putative Transcriptional regulator/sugar kinase n=4 Tax=Vibrio nigripulchritudo RepID=U4DHB8_9VIBR rbh
Putative Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:CCN43930.1}; TaxID=1238441 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio
putative Transcriptional regulator/sugar kinase
BD02T64_scaffold_1681_12
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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12654..13409
DNA (756bp) protein (252aa)
glucosamine-6-phosphate deaminase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planc
Glucosamine-6-phosphate deaminase n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SL82_PLABD rbh
BD02T64_scaffold_1681_13
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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13438..14598
DNA (1161bp) protein (387aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1238441 species
putative N-acetylglucosamine 6-phosphate deacetylase (EC:3.5.1.25)
Putative N-acetylglucosamine 6-phosphate deacetylase n=4 Tax=Vibrio nigripulchritudo RepID=U4DFU1_9VIBR rbh
BD02T64_scaffold_1681_14
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14639..15616
DNA (978bp) protein (326aa)
Putative TRAP-type C4-dicarboxylate transport system, periplasmic component n=4 Tax=Vibrio nigripulchritudo RepID=U4DMT8_9VIBR rbh
Putative TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:CCN43927.1}; TaxID=1238441 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionace
putative TRAP-type C4-dicarboxylate transport system, periplasmic component
BD02T64_scaffold_1681_15
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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15694..16200
DNA (507bp) protein (169aa)
Putative TRAP-type C4-dicarboxylate transport system, small permease component n=4 Tax=Vibrio nigripulchritudo RepID=U4HA61_9VIBR rbh
putative TRAP-type C4-dicarboxylate transport system, small permease component
Putative TRAP-type C4-dicarboxylate transport system, small permease component {ECO:0000313|EMBL:CCO57344.1}; TaxID=28173 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionac
BD02T64_scaffold_1681_16
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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16197..17489
DNA (1293bp) protein (431aa)
Putative TRAP-type C4-dicarboxylate transport system, large permease component n=6 Tax=Vibrio nigripulchritudo RepID=U4JWR6_9VIBR rbh
putative TRAP-type C4-dicarboxylate transport system, large permease component rbh
Putative TRAP-type C4-dicarboxylate transport system, large permease component {ECO:0000313|EMBL:CCN43925.1}; TaxID=1238441 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrion
BD02T64_scaffold_1681_17
Pantoea sp. PSNIH2, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17527..18714
DNA (1188bp) protein (396aa)
mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:00002
Mannonate dehydratase n=1 Tax=Glaciecola lipolytica E3 RepID=K6YB36_9ALTE
BD02T64_scaffold_1681_18
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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18711..19658
DNA (948bp) protein (316aa)
Kinase, PfkB family n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A695_9PROT
Kinase, PfkB family {ECO:0000313|EMBL:EHL97197.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Ac
PfkB
BD02T64_scaffold_1681_19
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19645..21048
DNA (1404bp) protein (468aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HA
Uronate isomerase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YL45_9RHIZ rbh
glucuronate isomerase
BD02T64_scaffold_1681_20
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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21076..22515
DNA (1440bp) protein (480aa)
Mannitol dehydrogenase domain protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A2M7_STAND rbh
Dioxygenase {ECO:0000313|EMBL:KKB13091.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
mannitol dehydrogenase
BD02T64_scaffold_1681_21
uncultured alpha proteobacterium EB080_L84F03, Alphaproteobacteria, Proteobacteria, Bacteria

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23302..23895
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=uncultured alpha proteobacterium EB080_L84F03 RepID=E0Y1K3_9PROT
Putative uncharacterized protein {ECO:0000313|EMBL:ADI20544.1}; TaxID=711004 species="Bacteria; Proteobacteria; Alphaproteobacteria; environmental samples.;" source="uncultured alpha proteobacterium E
transposase
BD02T64_scaffold_1681_22
Ruegeria sp. ANG-S4, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(23982..24467)
DNA (486bp) protein (162aa)
flavodoxin n=1 Tax=Ruegeria conchae RepID=UPI0002379975 rbh
Flavodoxin {ECO:0000313|EMBL:KIC46264.1}; TaxID=1577904 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-S4.;"
hypothetical protein
BD02T64_scaffold_1681_23
unknown

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comp(24714..24809)
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 23 items

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