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BD02T64_scaffold_1874

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1874_1

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2..514
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N225_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKN32928.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BD02T64_scaffold_1874_2
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(503..3064)
DNA (2562bp) protein (854aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacterace
histidine kinase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B72004 rbh
sensory box histidine kinase
BD02T64_scaffold_1874_3
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

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3538..3891
DNA (354bp) protein (118aa)
glyoxalase n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI000349CB77
glyoxalase/bleomycin resistance protein/dioxygenase; K06996 Tax=RBG_16_Betaproteobacteria_56_24_curated
glyoxalase/bleomycin resistance protein/dioxygenase
BD02T64_scaffold_1874_4
Nitrincola sp. AK23, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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4754..6121
DNA (1368bp) protein (456aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000364C6BC
Transcriptional regulatory protein ZraR {ECO:0000313|EMBL:EXJ09863.1}; TaxID=1229521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola sp. AK2
response regulator receiver protein
BD02T64_scaffold_1874_5
Osedax symbiont Rs1, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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6114..8159
DNA (2046bp) protein (682aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1330036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oc
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036BEF6F
periplasmic sensor signal transduction histidine kinase
BD02T64_scaffold_1874_6
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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8474..10042
DNA (1569bp) protein (523aa)
NAD(P) transhydrogenase subunit alpha {ECO:0000256|PIRNR:PIRNR000203}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000203};; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales
NAD(P) transhydrogenase subunit alpha n=1 Tax=Methylobacter marinus RepID=UPI000372129E rbh
NAD(P) transhydrogenase subunit alpha
BD02T64_scaffold_1874_7
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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10060..10737
DNA (678bp) protein (226aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}
NAD(P) transhydrogenase subunit beta n=1 Tax=Methylomicrobium album BG8 RepID=H8GGN6_METAL
pntB; pyridine nucleotide transhydrogenase subunit beta
BD02T64_scaffold_1874_8
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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10679..11416
DNA (738bp) protein (246aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}
NAD(P)(+) transhydrogenase (EC:1.6.1.2)
pyridine nucleotide transhydrogenase n=1 Tax=Methylomonas sp. MK1 RepID=UPI0003735F42
BD02T64_scaffold_1874_9

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11816..13552
DNA (1737bp) protein (579aa)
Putative uncharacterized protein n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5T302_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN14430.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
major facilitator superfamily permease rbh
BD02T64_scaffold_1874_10

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13642..15363
DNA (1722bp) protein (574aa)
Putative PQQ enzyme repeat protein n=1 Tax=uncultured marine microorganism HF4000_APKG8K5 RepID=B3TB54_9ZZZZ rbh
Putative PQQ enzyme repeat protein {ECO:0000313|EMBL:ABZ09819.1}; TaxID=455555 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG8K5.;"
PQQ enzyme repeat protein
BD02T64_scaffold_1874_11

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15507..16097
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_APKG8K5 RepID=B3TB53_9ZZZZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ09818.1}; TaxID=455555 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG8K5.;"
cytochrome c
BD02T64_scaffold_1874_12

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16131..16988
DNA (858bp) protein (286aa)
Putative ankyrin repeat protein n=1 Tax=uncultured marine microorganism HF4000_APKG8K5 RepID=B3TB52_9ZZZZ rbh
Putative ankyrin repeat protein {ECO:0000313|EMBL:ABZ09817.1}; TaxID=455555 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG8K5.;"
ankyrin
BD02T64_scaffold_1874_13
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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17193..17963
DNA (771bp) protein (257aa)
Putative Histidine kinase {ECO:0000313|EMBL:CCE24551.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CCE24551.1};; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococca
Putative Histidine kinase n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T0F9_META2
histidine kinase
BD02T64_scaffold_1874_14
Methylotenera versatilis, Methylotenera, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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17975..18403
DNA (429bp) protein (143aa)
BLUF domain protein n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DKL3_METS0 rbh
BLUF domain-containing protein
BLUF domain protein {ECO:0000313|EMBL:ADI30459.1}; TaxID=666681 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylotenera.;" source="Methylotenera versati
BD02T64_scaffold_1874_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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18400..18831
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X39_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85776.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
BD02T64_scaffold_1874_16

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comp(18840..19421)
DNA (582bp) protein (194aa)
Uncharacterized protein family UPF0029 n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N227_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN17369.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BD02T64_scaffold_1874_17
Rheinheimera nanhaiensis, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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19575..23291
DNA (3717bp) protein (1239aa)
putA; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12 1.5.99.8)
Proline dehydrogenase n=1 Tax=Rheinheimera nanhaiensis E407-8 RepID=I1DY54_9GAMM
Proline dehydrogenase {ECO:0000313|EMBL:GAB58982.1}; TaxID=562729 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Rheinheimera.;" source="Rheinheimera nanhaiensis
BD02T64_scaffold_1874_18

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23344..24726
DNA (1383bp) protein (461aa)
ATP-dependent RNA helicase DbpA n=1 Tax=Cycloclasticus sp. PY97M RepID=S2V997_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKN23520.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Superfamily II DNA and RNA helicase
BD02T64_scaffold_1874_19
Methylophaga thiooxydans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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24753..27617
DNA (2865bp) protein (955aa)
RNA polymerase-associated protein RapA {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010031}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010033};; ATP-dependent hel
RNA polymerase-associated protein RapA n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N229_9GAMM rbh
RNA polymerase
BD02T64_scaffold_1874_20

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27675..28910
DNA (1236bp) protein (412aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N230_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN69465.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RND family efflux transporter MFP subunit
BD02T64_scaffold_1874_21

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28903..32025
DNA (3123bp) protein (1041aa)
RND transporter, HAE1/HME family, permease protein n=1 Tax=Methylophaga thiooxydans DMS010 RepID=C0N231_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN69464.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RND multidrug efflux transporter
BD02T64_scaffold_1874_22

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32111..33271
DNA (1161bp) protein (387aa)
Putative outer membrane protein n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5T085_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN69461.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
outer membrane efflux protein
Displaying 22 items

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