ggKbase home page

BD02T64_scaffold_1946

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1946_1
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..382)
DNA (381bp) protein (127aa)
Integrase family protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JSR8_9GAMM
integrase family protein
Integrase family protein {ECO:0000313|EMBL:AEM46625.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Aci
BD02T64_scaffold_1946_2
unknown

Not on your lists

comp(386..589)
DNA (204bp) protein (68aa)

This feature has no annotations

BD02T64_scaffold_1946_3
unknown

Not on your lists

comp(610..930)
DNA (321bp) protein (107aa)

This feature has no annotations

BD02T64_scaffold_1946_4
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1075..2583)
DNA (1509bp) protein (503aa)
AAA ATPase domain protein n=1 Tax=Cycloclasticus sp. (strain P1) RepID=K0C5F4_CYCSP rbh
AAA ATPase
AAA ATPase domain protein {ECO:0000313|EMBL:AFT66902.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclastic
BD02T64_scaffold_1946_5
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2598..3401)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00036276CE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFT66903.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticus
BD02T64_scaffold_1946_6
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3601..3783
DNA (183bp) protein (61aa)
Transcriptional regulator, XRE family n=2 Tax=Thauera RepID=C4ZMK2_THASP
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACK53046.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (s
BD02T64_scaffold_1946_7
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3815..6580
DNA (2766bp) protein (922aa)
type III restriction endonuclease subunit R n=1 Tax=Vibrio tasmaniensis RepID=UPI0002DB7E7B rbh
Restriction endonuclease subunit R {ECO:0000313|EMBL:KDN95473.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hyd
Restriction enzymes type I helicase rbh
BD02T64_scaffold_1946_8
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

6635..8047
DNA (1413bp) protein (471aa)
Restriction endonuclease S subunit n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WHS9_9CYAN rbh
restriction endonuclease S subunit
Restriction endonuclease S subunit {ECO:0000313|EMBL:AFZ19366.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 711
BD02T64_scaffold_1946_9
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8037..10526
DNA (2490bp) protein (830aa)
Type III restriction protein res subunit n=1 Tax=Geobacter sp. (strain M18) RepID=E8WQ86_GEOS8 rbh
type III restriction protein res subunit
Type III restriction protein res subunit {ECO:0000313|EMBL:ADW11994.1}; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Ge
BD02T64_scaffold_1946_10
uncultured SUP05 cluster bacterium, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10671..11126
DNA (456bp) protein (152aa)
DNA-binding protein n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KBG1_9GAMM rbh
DNA-binding protein {ECO:0000313|EMBL:EEZ80547.1}; TaxID=655186 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales; SUP05 cluster; environmental
DNA-binding protein
BD02T64_scaffold_1946_11
uncultured SUP05 cluster bacterium, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11130..11717
DNA (588bp) protein (196aa)
Fic family protein n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KBG0_9GAMM rbh
Fic family protein {ECO:0000313|EMBL:EEZ80546.1}; TaxID=655186 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales; SUP05 cluster; environmental s
Mobile mystery protein B
BD02T64_scaffold_1946_12
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11714..12022
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI0003732B99
DNA polymerase beta domain-containing protein; K07075 Tax=GWC2_Pelobacteraceae_58_13_curated
DNA polymerase beta domain-containing protein
BD02T64_scaffold_1946_13
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12074..13534
DNA (1461bp) protein (487aa)
Type I restriction modification system, methyltransferase subunit n=1 Tax=Cycloclasticus sp. (strain P1) RepID=K0C672_CYCSP rbh
Type I restriction modification system, methyltransferase subunit
Type I restriction modification system, methyltransferase subunit {ECO:0000313|EMBL:AFT67171.1}; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae
BD02T64_scaffold_1946_14
Methylophaga aminisulfidivorans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13531..13737
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5SXK3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGL55168.1}; TaxID=1026882 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga am
hypothetical protein
BD02T64_scaffold_1946_15
Alishewanella jeotgali, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13749..14219
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Alishewanella jeotgali KCTC 22429 RepID=H3ZFE9_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:EHR40710.1}; TaxID=1129374 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella j
hypothetical protein
BD02T64_scaffold_1946_16
unknown

Not on your lists

14461..15426
DNA (966bp) protein (322aa)

This feature has no annotations

BD02T64_scaffold_1946_17
Nitrincola sp. AK23, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15796..16848)
DNA (1053bp) protein (351aa)
TraA conjugal transfer protein TraA n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QML1_DESAH rbh
DNA strand transferase {ECO:0000313|EMBL:EXJ09035.1}; TaxID=1229521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola sp. AK23.;"
traA; TraA; conjugal transfer protein TraA
BD02T64_scaffold_1946_18
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17005..17853)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI00036F9231
Competence CoiA-like family protein {ECO:0000313|EMBL:KIN90265.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SW
hypothetical protein
BD02T64_scaffold_1946_19
unknown

Not on your lists

comp(17810..17938)
DNA (129bp) protein (43aa)

This feature has no annotations

BD02T64_scaffold_1946_20
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17976..18962
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALMg13-2 RepID=UPI00036EBD24 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX16079.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.
BD02T64_scaffold_1946_21
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19001..20308)
DNA (1308bp) protein (436aa)
DNA polymerase V subunit UmuC n=1 Tax=Methylomicrobium buryatense RepID=UPI00036F4B12 rbh
Nucleotidyltransferase/DNA polymerase involved in DNA repair {ECO:0000313|EMBL:EIC27858.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Meth
umuC; DNA polymerase V subunit C
BD02T64_scaffold_1946_22
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20311..20727)
DNA (417bp) protein (139aa)
DNA repair protein n=1 Tax=Methylomicrobium buryatense RepID=UPI000348A57B rbh
SOS-response transcriptional repressors (RecA-mediated autopeptidases)
SOS-response transcriptional repressors (RecA-mediated autopeptidases) {ECO:0000313|EMBL:AGS39713.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Pisciricketts
BD02T64_scaffold_1946_23
Acinetobacter junii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21022..21921
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00036D7DC2
Uncharacterized protein {ECO:0000313|EMBL:ENV66720.1}; TaxID=1217664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter juni
helicase
Displaying 23 items

View Taxonomy