ggKbase home page

BD02T64_scaffold_396

Search features with annotation key words

Displaying items 1-30 of 91 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_396_1
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..839
DNA (837bp) protein (279aa)
Putative hydrolase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YAC9_9GAMM
Putative hydrolase {ECO:0000313|EMBL:EAW33083.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143.;"
putative hydrolase
BD02T64_scaffold_396_2
unknown

Not on your lists

927..1163
DNA (237bp) protein (79aa)

This feature has no annotations

BD02T64_scaffold_396_3
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1206..1535)
DNA (330bp) protein (110aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=1160285 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Mic
muraminidase n=1 Tax=Methylovulum miyakonense RepID=UPI00036FA4B4
muraminidase
BD02T64_scaffold_396_4
gamma proteobacterium NOR5-3, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1689..2498
DNA (810bp) protein (270aa)
Putative uncharacterized protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KPC3_9GAMM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EED30957.1}; TaxID=566466 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium NOR5-3.;"
family 3 extracellular solute-binding protein
BD02T64_scaffold_396_5
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2678..3442)
DNA (765bp) protein (255aa)
Acyl-CoA dehydrogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H9R8_9BRAD
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ERF86577.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
acyl-CoA dehydrogenase-like
BD02T64_scaffold_396_6
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3439..3630)
DNA (192bp) protein (64aa)
Acyl-CoA dehydrogenase fadE12 {ECO:0000313|EMBL:EWS64784.1}; EC=1.3.99.- {ECO:0000313|EMBL:EWS64784.1};; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad
Acyl-CoA dehydrogenase-like protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZG0_9BURK
acyl-CoA dehydrogenase-like
BD02T64_scaffold_396_7
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3627..3818)
DNA (192bp) protein (64aa)
Acyl-CoA dehydrogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H9R8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42310.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
acyl-CoA dehydrogenase-like
BD02T64_scaffold_396_8
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3844..5007)
DNA (1164bp) protein (388aa)
Acyl-CoA dehydrogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H9R8_9BRAD
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ERF86577.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
acyl-CoA dehydrogenase-like
BD02T64_scaffold_396_9
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5079..6242)
DNA (1164bp) protein (388aa)
Acyl-CoA dehydrogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H9R8_9BRAD
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ERF86577.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
acyl-CoA dehydrogenase-like
BD02T64_scaffold_396_10
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6283..7446)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PS21_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42310.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
acyl-CoA dehydrogenase-like
BD02T64_scaffold_396_11
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7490..8653)
DNA (1164bp) protein (388aa)
Acyl-CoA dehydrogenase-like n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q11ZZ9_POLSJ
acyl-CoA dehydrogenase-like
Acyl-CoA dehydrogenase-like {ECO:0000313|EMBL:ABE47143.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (
BD02T64_scaffold_396_12
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9105..10508
DNA (1404bp) protein (468aa)
Membrane-bound lytic murein transglycosylase F {ECO:0000256|HAMAP-Rule:MF_02016, ECO:0000256|SAAS:SAAS00176609}; EC=4.2.2.n1 {ECO:0000256|HAMAP-Rule:MF_02016, ECO:0000256|SAAS:SAAS00166192};; Murein l
Membrane-bound lytic murein transglycosylase F n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YSE4_9GAMM
lytic murein transglycosylase-like protein
BD02T64_scaffold_396_13
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10557..10988)
DNA (432bp) protein (144aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadal
Cytidine/deoxycytidylate deaminase, zinc-binding protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZCT4_9GAMM
cytosine/adenosine deaminases
BD02T64_scaffold_396_14
Pseudomonas sp. MT-1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11107..11565)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Pseudomonas stutzeri RepID=UPI000309FE7A
MarR family transcriptional regulator {ECO:0000313|EMBL:BAP79309.1}; TaxID=150396 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu
MarR family transcriptional regulator
BD02T64_scaffold_396_15
Marinobacter santoriniensis, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11755..12900
DNA (1146bp) protein (382aa)
Acyl-CoA dehydrogenase n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7DA34_9ALTE
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EMP54512.1}; TaxID=1288826 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sant
badJ; cyclohexanecarboxyl-CoA dehydrogenase
BD02T64_scaffold_396_16
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12963..13742
DNA (780bp) protein (260aa)
short chain enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZH1_9BURK
Enoyl-CoA hydratase {ECO:0000313|EMBL:EHL22345.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
BD02T64_scaffold_396_17
bacterium YEK0313, Bacteria

Not on your lists

13911..14693
DNA (783bp) protein (261aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=1522316 spec
Naphthoate synthase n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4H2_POLGS
menB; Naphthoate synthase
BD02T64_scaffold_396_18
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14739..15536
DNA (798bp) protein (266aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q11ZZ1_POLSJ
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABE47151.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polar
BD02T64_scaffold_396_19
Shewanella benthica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15705..16883)
DNA (1179bp) protein (393aa)
ABC transporter permease n=1 Tax=Psychromonas hadalis RepID=UPI0003B5774A
Uncharacterized protein {ECO:0000313|EMBL:EDP99701.1}; TaxID=314608 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella benthica K
major facilitator superfamily transporter
BD02T64_scaffold_396_20
unknown

Not on your lists

comp(17117..17230)
DNA (114bp) protein (38aa)

This feature has no annotations

BD02T64_scaffold_396_21
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17533..19197
DNA (1665bp) protein (555aa)
Sulfite reductase n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KFE8_SIMAS
Sulfite reductase {ECO:0000313|EMBL:KJS04220.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
sulfite reductase
BD02T64_scaffold_396_22
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19181..19690
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI0003712D1B
Oxidoreductase {ECO:0000313|EMBL:KJS04219.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
BD02T64_scaffold_396_23
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19767..20933
DNA (1167bp) protein (389aa)
sodium:hydrogen antiporter n=1 Tax=gamma proteobacterium SCGC AAA160-D02 RepID=UPI00036CA1BA
Sodium/hydrogen antiporter {ECO:0000313|EMBL:EAS47563.1}; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" source="gamma proteobacterium HTCC2207.;"
sodium/hydrogen antiporter
BD02T64_scaffold_396_24
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20951..22006)
DNA (1056bp) protein (352aa)
putative periplasmic protease (EC:3.4.21.-)
Possible protease SohB n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PHP3_CELJU
Peptidase {ECO:0000313|EMBL:KJS04218.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
BD02T64_scaffold_396_25
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22243..23895)
DNA (1653bp) protein (551aa)
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=gamma proteobacterium IMCC1989 RepID=F3LGL7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJS04217.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
BD02T64_scaffold_396_26
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24164..24886)
DNA (723bp) protein (241aa)
DNA polymerase III, epsilon subunit (EC:2.7.7.7)
DNA polymerase III, epsilon subunit n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YSZ8_9GAMM rbh
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:EAS47689.1}; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" source="gamma proteobacterium HTCC2207
BD02T64_scaffold_396_27
Spongiibacter sp. IMCC21906, Spongiibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24883..25293)
DNA (411bp) protein (137aa)
Ribonuclease HI {ECO:0000313|EMBL:AKH69775.1}; EC=3.1.26.4 {ECO:0000313|EMBL:AKH69775.1};; TaxID=1620392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Spon
RNaseH ribonuclease n=1 Tax=Gilvimarinus chinensis RepID=UPI00036F53B2
rnhA; RNase H
BD02T64_scaffold_396_28
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25293..26090)
DNA (798bp) protein (266aa)
Generic methyl-transferase n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PHP9_CELJU
methyl-transferase
Generic methyl-transferase {ECO:0000313|EMBL:ACE84663.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japon
BD02T64_scaffold_396_29
Endozoicomonas elysicola, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26175..26957
DNA (783bp) protein (261aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000
hydroxyacylglutathione hydrolase (EC:3.1.2.6)
hypothetical protein n=1 Tax=Endozoicomonas elysicola RepID=UPI00035CC641
BD02T64_scaffold_396_30
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27076..28581
DNA (1506bp) protein (502aa)
Lytic transglycosylase n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KUD1_SIMAS
lytic transglycosylase
Lytic transglycosylase {ECO:0000313|EMBL:AFU97572.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCR
Displaying items 1-30 of 91 in total

View Taxonomy