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BD02T64_scaffold_406

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_406_1
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..227)
DNA (225bp) protein (75aa)
Translation initiation factor IF-3 n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YPL1_9GAMM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MOLA455.;"
infC; translation initiation factor IF-3
BD02T64_scaffold_406_2
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(366..2288)
DNA (1923bp) protein (641aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
threonyl-tRNA synthetase n=1 Tax=Microbulbifer agarilyticus RepID=UPI000255B824
BD02T64_scaffold_406_3
Pseudoalteromonas lipolytica, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2772..3536)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CWA6_9FIRM
Protein tyrosine phosphatase {ECO:0000313|EMBL:EWH07050.1}; TaxID=1452721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="
protein tyrosine/serine phosphatase
BD02T64_scaffold_406_4
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3865..4821
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ETI0_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK52332.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestr
BD02T64_scaffold_406_5
unknown

Not on your lists

4932..5498
DNA (567bp) protein (189aa)

This feature has no annotations

BD02T64_scaffold_406_6
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5577..6788
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00037ABA78 rbh
hypothetical protein
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:CDM25275.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella def
BD02T64_scaffold_406_7
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6837..8057
DNA (1221bp) protein (407aa)
aminoglycoside phosphotransferase n=1 Tax=Nevskia ramosa RepID=UPI0003B7995C
Aminoglycoside phosphotransferase
Acyl-CoA dehydrogenase protein {ECO:0000313|EMBL:CDM25241.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellani
BD02T64_scaffold_406_8
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8125..9855)
DNA (1731bp) protein (577aa)
gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltranspeptidase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTI5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJS05280.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
BD02T64_scaffold_406_9
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10089..11072
DNA (984bp) protein (328aa)
Acetyltransferase, GNAT family n=1 Tax=gamma proteobacterium IMCC3088 RepID=F3L0Z8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KJS05261.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
N-acetyltransferase GCN5
BD02T64_scaffold_406_10
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11369..13276
DNA (1908bp) protein (636aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI00035D20E2
Colicin I receptor {ECO:0000313|EMBL:ETN93132.1}; Flags: Precursor;; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MOLA455.;"
TonB-dependent receptor
BD02T64_scaffold_406_11
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13382..15553)
DNA (2172bp) protein (724aa)
glcB; malate synthase G (EC:2.3.3.9)
Malate synthase G {ECO:0000256|HAMAP-Rule:MF_00641, ECO:0000256|RuleBase:RU003572}; EC=2.3.3.9 {ECO:0000256|HAMAP-Rule:MF_00641, ECO:0000256|RuleBase:RU003572};; TaxID=349521 species="Bacteria; Proteo
malate synthase n=1 Tax=Hahella ganghwensis RepID=UPI0003705B85
BD02T64_scaffold_406_12
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15685..16629)
DNA (945bp) protein (315aa)
LysR family transcriptional regulator n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KI23_SIMAS
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AFU97850.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain DSM 21679 /
BD02T64_scaffold_406_13
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16730..17641)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2HH99_BURVI
Uncharacterized protein {ECO:0000313|EMBL:EXI82267.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein
BD02T64_scaffold_406_14
R_Gammaproteobacteria_60_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17853..18644
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Pseudomonas nitroreducens RepID=UPI00035E160D
phosphoribosyltransferase Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_60_43_curated
competence protein ComF
BD02T64_scaffold_406_15
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18689..19513
DNA (825bp) protein (275aa)
serine acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=Cellvibrio sp. BR RepID=I3ID52_9GAMM
Serine acetyltransferase {ECO:0000313|EMBL:KJS09011.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
BD02T64_scaffold_406_16
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19586..20545)
DNA (960bp) protein (320aa)
Elongation factor P--(R)-beta-lysine ligase {ECO:0000256|SAAS:SAAS00088906}; EC=6.3.1.- {ECO:0000256|SAAS:SAAS00088909};; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source
Lysyl-tRNA synthetase-related protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQI3_9GAMM
lysyl-tRNA synthetase
BD02T64_scaffold_406_17
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20623..21192)
DNA (570bp) protein (190aa)
Elongation factor P n=1 Tax=Teredinibacter turnerae (strain ATCC 39867 / T7901) RepID=EFP_TERTT
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteri
efp; translation elongation factor P
BD02T64_scaffold_406_18
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21224..22267
DNA (1044bp) protein (348aa)
lysine 2,3-aminomutase n=1 Tax=Pseudomonas pelagia RepID=UPI00039FC672
Lysine 2,3-aminomutase {ECO:0000313|EMBL:KJS09014.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
lysine 2,3-aminomutase
BD02T64_scaffold_406_19
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22468..24648
DNA (2181bp) protein (727aa)
ferrous iron transporter C n=1 Tax=Pseudomonas stutzeri RepID=UPI0002DCE6DB
Uncharacterized protein {ECO:0000313|EMBL:KJS09016.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
ferrous iron transporter C
BD02T64_scaffold_406_20
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24679..25059)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium BDW918 RepID=I2JGB2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIF42014.1}; TaxID=1168065 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium BDW918.;"
hypothetical protein
BD02T64_scaffold_406_21
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25157..25654)
DNA (498bp) protein (166aa)
Thioredoxin, putative n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YP57_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJS04143.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
peroxiredoxin
BD02T64_scaffold_406_22
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25611..26891)
DNA (1281bp) protein (427aa)
tRNA-processing ribonuclease BN (EC:3.1.-.-)
UPF0761 membrane protein TERTU_3006 n=1 Tax=Teredinibacter turnerae (strain ATCC 39867 / T7901) RepID=Y3006_TERTT
UPF0761 membrane protein VR73_15800 {ECO:0000256|HAMAP-Rule:MF_00672}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
BD02T64_scaffold_406_23
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27088..27840)
DNA (753bp) protein (251aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTZ6_PARL1
SPG23_c17, whole genome shotgun sequence {ECO:0000313|EMBL:KIS27541.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;
short-chain dehydrogenase/reductase SDR
BD02T64_scaffold_406_24
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28418..29149)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DTA6_PSEMN rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD03809.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
hypothetical protein
BD02T64_scaffold_406_25
Shewanella benthica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29418..29972)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Shewanella benthica KT99 RepID=A9DFU5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDP99860.1}; TaxID=314608 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella benthica K
hypothetical protein
BD02T64_scaffold_406_26
marine gamma proteobacterium HTCC2080, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30272..30871)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z1Q4_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EAW41878.1}; TaxID=247639 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2080.;"
conserved hypothetical protein
BD02T64_scaffold_406_27
gamma proteobacterium IMCC3088, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30881..32203)
DNA (1323bp) protein (441aa)
Fe-S oxidoreductase-like protein in Rubrerythrin cluster n=1 Tax=gamma proteobacterium IMCC3088 RepID=F3KZ52_9GAMM rbh
Fe-S oxidoreductase-like protein in Rubrerythrin cluster {ECO:0000313|EMBL:EGG30539.1}; TaxID=876044 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma prot
hypothetical protein
BD02T64_scaffold_406_28

Not on your lists

comp(32346..32765)
DNA (420bp) protein (140aa)
Rubrerythrin n=3 Tax=Cycloclasticus RepID=K0C724_CYCSP
Marine sediment metagenome DNA, contig: S01H1_S34945 {ECO:0000313|EMBL:GAG35961.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rubrerythrin
BD02T64_scaffold_406_29
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33685..33891)
DNA (207bp) protein (69aa)
cold-shock protein n=1 Tax=Amphritea japonica RepID=UPI0003828725 rbh
Putative cold-shock DNA-binding domain protein {ECO:0000313|EMBL:KGJ95706.1}; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" sou
cold shock DNA-binding domain-containing protein
BD02T64_scaffold_406_30
marine actinobacterium MedAcidi-G3, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34325..35176)
DNA (852bp) protein (284aa)
Uncharacterized protein {ECO:0000313|EMBL:KIE51222.1}; Flags: Fragment;; TaxID=1550402 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G3.;"
Displaying items 1-30 of 56 in total

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