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BD02T64_scaffold_1043

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_1043_1
Halomonas sp. BC04, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3..230)
DNA (228bp) protein (76aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001329}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:
methionyl-tRNA synthetase n=1 Tax=Marinobacterium rhizophilum RepID=UPI000374C2FC
methionyl-tRNA synthetase
BD02T64_scaffold_1043_2
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

320..1147
DNA (828bp) protein (276aa)
ATPase involved in chromosome partitioning n=1 Tax=Congregibacter litoralis KT71 RepID=A4ACM0_9GAMM rbh
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:EAQ96234.1}; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Congregibacter.;" source="Congregi
mrp; hypothetical protein
BD02T64_scaffold_1043_3
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1205..1777
DNA (573bp) protein (191aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1629722 species="
Deoxycytidine triphosphate deaminase n=2 Tax=root RepID=I3IBU3_9GAMM
dcd; deoxycytidine triphosphate deaminase
BD02T64_scaffold_1043_4
unknown

Not on your lists

2162..2977
DNA (816bp) protein (272aa)

This feature has no annotations

BD02T64_scaffold_1043_5
unknown

Not on your lists

comp(3366..3464)
DNA (99bp) protein (33aa)

This feature has no annotations

BD02T64_scaffold_1043_6
Neptuniibacter caesariensis, Neptuniibacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3752..4156)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI0003670E6B
Uncharacterized protein {ECO:0000313|EMBL:EAR60255.1}; TaxID=207954 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Neptuniibacter.;" source="Neptuniibacter caesariensis.;"
putative uncharacterized protein
BD02T64_scaffold_1043_7
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4156..4506)
DNA (351bp) protein (117aa)
Putative nitrogen regulatory protein P-II n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IUM3_9GAMM
Putative nitrogen regulatory protein P-II {ECO:0000313|EMBL:EGW22746.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source
nitrogen regulatory protein PII
BD02T64_scaffold_1043_8
Moritella sp. PE36, Moritella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4525..5328)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6FIQ9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EDM64986.1}; TaxID=58051 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Moritellaceae; Moritella.;" source="Moritella sp. PE36.;"
membrane protein
BD02T64_scaffold_1043_9
Moritella sp. PE36, Moritella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5325..6029)
DNA (705bp) protein (235aa)
Putative PTS system mannose-specific, factor IIC n=1 Tax=Moritella sp. PE36 RepID=A6FIR0_9GAMM rbh
Putative PTS system mannose-specific, factor IIC {ECO:0000313|EMBL:EDM64987.1}; TaxID=58051 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Moritellaceae; Moritella.;" source=
membrane protein
BD02T64_scaffold_1043_10
R_Pseudomonas_63_210, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6241..7335)
DNA (1095bp) protein (365aa)
Molybdenum transport ATP-binding protein modC (TC 3.A.1.8.1) n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DE08_9GAMM
ABC transporter ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated
molybdenum ABC transporter ATP-binding protein
BD02T64_scaffold_1043_11
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7347..8030)
DNA (684bp) protein (228aa)
Molybdenum transport system permease protein n=33 Tax=Bordetella RepID=F4LB04_BORPC rbh
modC; molybdenum transport system permease
modB1; molybdate ABC transporter, permease protein Tax=CG_Mariprof_05
BD02T64_scaffold_1043_12
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8286..8501)
DNA (216bp) protein (72aa)
Ribosome modulation factor n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=RMF_CELJU
ribosome modulation factor
Ribosome modulation factor {ECO:0000255|HAMAP-Rule:MF_00919}; Short=RMF {ECO:0000255|HAMAP-Rule:MF_00919};; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudo
BD02T64_scaffold_1043_13
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8652..10868
DNA (2217bp) protein (739aa)
Ribosomal RNA large subunit methyltransferase K/L n=1 Tax=Cellvibrio sp. BR RepID=I3IBF2_9GAMM
Ribosomal RNA large subunit methyltransferase K/L {ECO:0000256|HAMAP-Rule:MF_01858, ECO:0000256|SAAS:SAAS00183812}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gamm
rlmL; 23S rRNA m(2)G2445 methyltransferase
BD02T64_scaffold_1043_14
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10908..11186
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YPL4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJS08301.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
BD02T64_scaffold_1043_15
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(11215..12087)
DNA (873bp) protein (291aa)
hypothetical protein id=14426198 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein Tax=CSP1_2_Dadabacteria
hypothetical protein
BD02T64_scaffold_1043_16
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12139..12960)
DNA (822bp) protein (274aa)
Hydrolase, TatD family protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRG5_9GAMM
Hydrolase, TatD family protein {ECO:0000313|EMBL:EAS46643.1}; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" source="gamma proteobacterium HTCC2207.;"
tatD; TatD-related deoxyribonuclease
BD02T64_scaffold_1043_17
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12982..15063)
DNA (2082bp) protein (694aa)
Probable soluble lytic transglycosylase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRG6_9GAMM rbh
Probable soluble lytic transglycosylase {ECO:0000313|EMBL:EAS46642.1}; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" source="gamma proteobacterium HTCC
lytic murein transglycosylase rbh
BD02T64_scaffold_1043_18
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15133..15573)
DNA (441bp) protein (147aa)
Universal stress protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRG7_9GAMM
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
universal stress protein A
BD02T64_scaffold_1043_19
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15638..16126
DNA (489bp) protein (163aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS08306.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
BD02T64_scaffold_1043_20
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16311..18944
DNA (2634bp) protein (878aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1629722 species="Bacteria; Proteobac
topA; DNA topoisomerase I (EC:5.99.1.2)
topoisomerase I n=1 Tax=Microbulbifer agarilyticus RepID=UPI000255B798
BD02T64_scaffold_1043_21
unknown

Not on your lists

18982..19482
DNA (501bp) protein (167aa)

This feature has no annotations

BD02T64_scaffold_1043_22
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19512..20021)
DNA (510bp) protein (170aa)
Cyclic nucleotide-binding protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SD50_9RHIZ rbh
cyclic nucleotide-binding protein
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:AHB47990.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomi
BD02T64_scaffold_1043_23
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20455..22503)
DNA (2049bp) protein (683aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AAA160-D02 RepID=UPI0003797006
D-amino acid oxidase family protein
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein
BD02T64_scaffold_1043_24
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22500..23393)
DNA (894bp) protein (298aa)
LysR family transcriptional regulator n=1 Tax=gamma proteobacterium BDW918 RepID=I2JK55_9GAMM rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KJS08921.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
transcriptional regulator, LysR family
BD02T64_scaffold_1043_25
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23523..24959
DNA (1437bp) protein (479aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
isopropylmalate isomerase large subunit (EC:4.2.1.33)
isopropylmalate isomerase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B3960A rbh
BD02T64_scaffold_1043_26

Not on your lists

24969..25613
DNA (645bp) protein (215aa)
leuD; 3-isopropylmalate isomerase subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Marinobacter hydrocarbonoclasticus ATCC 49840 RepID=H8WDZ9_MARHY
Uncharacterized protein {ECO:0000313|EMBL:KKN16205.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BD02T64_scaffold_1043_27
RLO_Pseudomonas_59_9, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25683..26795
DNA (1113bp) protein (371aa)
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11) Tax=RifCSPlowO2_12_Pseudomonas_59_9_curated
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Pseudomonas sp. CFII64 RepID=S6HAM1_9PSED rbh
BD02T64_scaffold_1043_28
Aeromonas salmonicida, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26852..27877
DNA (1026bp) protein (342aa)
semialdehyde dehydrogenase n=1 Tax=Aeromonas hydrophila RepID=UPI0002D5B685
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:M
aspartate-semialdehyde dehydrogenase
BD02T64_scaffold_1043_29
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28032..30530
DNA (2499bp) protein (833aa)
Peptidoglycan-binding LysM n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YB02_9GAMM
Peptigoglycan-binding protein LysM {ECO:0000313|EMBL:KJH81617.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
FimV N-terminal domain-containing protein
BD02T64_scaffold_1043_30
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30577..31449
DNA (873bp) protein (291aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YT79_9GAMM
tRNA pseudouridine synthase A
Displaying items 1-30 of 35 in total

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