ggKbase home page

BD02T64_scaffold_3056

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_3056_1
unknown

Not on your lists

comp(96..362)
DNA (267bp) protein (89aa)

This feature has no annotations

BD02T64_scaffold_3056_2
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(416..3616)
DNA (3201bp) protein (1067aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colw
Multi-sensor hybrid histidine kinase n=1 Tax=Vibrio orientalis CIP 102891 = ATCC 33934 RepID=C9QLS5_VIBOR
signal transduction histidine kinase
BD02T64_scaffold_3056_3
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3606..4559)
DNA (954bp) protein (318aa)
ABC transporter, substrate binding protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GFG3_9GAMM
ABC transporter, substrate binding protein {ECO:0000313|EMBL:EPJ43174.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" so
putative ABC-type transport system, periplasmic component
BD02T64_scaffold_3056_4
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4685..5437)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium BDW918 RepID=I2JKI2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJE41962.1}; TaxID=485447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actin
hypothetical protein
BD02T64_scaffold_3056_5
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5839..6690
DNA (852bp) protein (284aa)
SMP-30/gluconolaconase/LRE domain-containing protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MM28_9BURK rbh
SMP-30/gluconolaconase/LRE domain-containing protein
SMP-30/gluconolaconase/LRE domain-containing protein {ECO:0000313|EMBL:AET95122.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia
BD02T64_scaffold_3056_6
Pseudomonas viridiflava, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6772..7248
DNA (477bp) protein (159aa)
Molybdopterin biosynthesis MoaE n=1 Tax=Pseudomonas viridiflava UASWS0038 RepID=K6C814_PSEVI
Strain LMCA8 contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ37241.1}; TaxID=33069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;
molybdopterin converting factor, large subunit
BD02T64_scaffold_3056_7
Idiomarina salinarum, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7245..7859
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Rheinheimera perlucida RepID=UPI00037B5178
Uncharacterized protein {ECO:0000313|EMBL:KFZ30749.1}; TaxID=435908 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina salinarum.
hypothetical protein
BD02T64_scaffold_3056_8
Alcanivorax sp. 19-m-6, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7919..10084
DNA (2166bp) protein (722aa)
recQ1; ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
hypothetical protein n=1 Tax=Gilvimarinus chinensis RepID=UPI000377AC4F
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:KGD65302.1}; TaxID=1177154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcaniv
BD02T64_scaffold_3056_9
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10229..12127)
DNA (1899bp) protein (633aa)
N-acyl-D-aspartate/D-glutamate deacylase n=1 Tax=Congregibacter litoralis KT71 RepID=A4AB74_9GAMM
N-acyl-D-aspartate/D-glutamate deacylase {ECO:0000313|EMBL:EAQ96628.2}; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Congregibacter.;" source="Congregiba
hypothetical protein
BD02T64_scaffold_3056_10
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12507..12917)
DNA (411bp) protein (137aa)
MaoC like domain-containing protein n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2GFQ4_9GAMM
MaoC like domain-containing protein
MaoC like domain-containing protein {ECO:0000313|EMBL:AJD46548.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alca
BD02T64_scaffold_3056_11
Halomonas sp. KO116, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12921..13376)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KQG8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY49298.1}; TaxID=1504981 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. KO116
BD02T64_scaffold_3056_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13464..13751)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y7U8_9GAMM
antibiotic biosynthesis monooxygenase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
antibiotic biosynthesis monooxygenase domain-containing protein
BD02T64_scaffold_3056_13
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13933..14709
DNA (777bp) protein (259aa)
Alpha/beta hydrolase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IY70_RHOP2
Alpha/beta hydrolase {ECO:0000313|EMBL:ETR75693.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
alpha/beta hydrolase
BD02T64_scaffold_3056_14
uncultured gamma proteobacterium HF0010_16J05, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14717..14848)
DNA (132bp) protein (44aa)
Biotin-(Acetyl-CoA carboxylase) ligase {ECO:0000313|EMBL:ADI16881.1}; TaxID=710981 species="Bacteria; Proteobacteria; Gammaproteobacteria; environmental samples.;" source="uncultured gamma proteobacte
Displaying 14 items

View Taxonomy