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BD02T64_scaffold_111

Search features with annotation key words

Displaying items 31-60 of 141 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_111_31
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(35637..36998)
-----------------
DNA (1362bp)
protein (454aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MKF3_9EURY rbh
Uncharacterized protein {ECO:0000313|EMBL:KKH02830.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina maze
hypothetical protein
BD02T64_scaffold_111_32
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37087..38079)
-----------------
DNA (993bp)
protein (331aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZFU9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB54534.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordon
glycosyl transferase
BD02T64_scaffold_111_33

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comp(38162..38632)
-----------------
DNA (471bp)
protein (157aa)
Serine acetyltransferase {ECO:0000313|EMBL:EKE04301.1}; EC=2.3.1.30 {ECO:0000313|EMBL:EKE04301.1};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cysE; serine acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=uncultured bacterium RepID=K2DEP5_9BACT rbh
BD02T64_scaffold_111_34
BJP_IG2158_Planctomycetes_45_10, Phycisphaerae, Planctomycetes, Bacteria

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comp(38616..39782)
-----------------
DNA (1167bp)
protein (389aa)
hypothetical protein n=1 Tax=Psychromonas ossibalaenae RepID=UPI00037670A5 rbh
group 1 glycosyl transferase
Tax=BJP_IG2158_Planctomycetes_45_10
BD02T64_scaffold_111_35
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(39793..41079)
-----------------
DNA (1287bp)
protein (429aa)
Membrane protein of ExoQ family,involved in exopolysaccharide production n=1 Tax=Vibrio sp. EJY3 RepID=H2IEQ6_9VIBR
O-antigen polymerase Tax=RBG_16_Actinobacteria_68_21_curated
membrane protein of ExoQ family,involved in exopolysaccharide production
BD02T64_scaffold_111_36
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(41080..42330)
-----------------
DNA (1251bp)
protein (417aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) RepID=I4BX08_ANAMD rbh
membrane protein
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:AFM21815.1}; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerob
BD02T64_scaffold_111_37
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(42444..43586)
-----------------
DNA (1143bp)
protein (381aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:CCE24494.1}; EC=5.1.3.14 {ECO:0000313|EMBL:CCE24494.1};; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Me
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Methylomicrobium buryatense RepID=UPI000348DCDE rbh
wecB; UDP-N-acetylglucosamine 2-epimerase
BD02T64_scaffold_111_38
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43597..44805)
-----------------
DNA (1209bp)
protein (403aa)
UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase {ECO:0000313|EMBL:CCE25200.1}; EC=1.1.1.- {ECO:0000313|EMBL:CCE25200.1};; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methy
UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SVW5_META2 rbh
rffD; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase
BD02T64_scaffold_111_39
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44919..45710)
-----------------
DNA (792bp)
protein (264aa)
general secretion pathway protein n=1 Tax=Methylomicrobium buryatense RepID=UPI00034A3660
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE23729.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicro
BD02T64_scaffold_111_40
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(45832..46794)
-----------------
DNA (963bp)
protein (321aa)
Capsular exopolysaccharide family {ECO:0000313|EMBL:EGW20745.1}; EC=2.7.10.2 {ECO:0000313|EMBL:EGW20745.1};; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methy
tyrosine-protein kinase Wzc (EC:2.7.10.2)
exopolysaccharide biosynthesis protein n=1 Tax=Methylobacter marinus RepID=UPI00036624CC rbh
BD02T64_scaffold_111_41
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(46909..48693)
-----------------
DNA (1785bp)
protein (595aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E3B9_9GAMM rbh
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EGV30308.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thio
hypothetical protein
BD02T64_scaffold_111_42

Not on your lists

comp(48754..49932)
-----------------
DNA (1179bp)
protein (393aa)
Long-chain fatty acid transport protein n=1 Tax=Methylophaga lonarensis MPL RepID=M7PKF5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KKM96736.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
lipopolysaccharide biosynthesis protein
BD02T64_scaffold_111_43

Not on your lists

comp(49946..50530)
-----------------
DNA (585bp)
protein (195aa)
Polysaccharide export protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0Q2_NITHN rbh
Uncharacterized protein {ECO:0000313|EMBL:KKM16558.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
polysaccharide export protein
BD02T64_scaffold_111_44
unknown

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comp(50849..51388)
-----------------
DNA (540bp)
protein (180aa)

This feature has no annotations

BD02T64_scaffold_111_45
unknown

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comp(51554..52090)
-----------------
DNA (537bp)
protein (179aa)

This feature has no annotations

BD02T64_scaffold_111_46
Pseudomonas sp. GM49, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52506..53534
-----------------
DNA (1029bp)
protein (343aa)
DNA-binding protein with HTH domain n=1 Tax=Pseudomonas sp. GM49 RepID=J3GIE5_9PSED
DNA-binding protein with HTH domain {ECO:0000313|EMBL:EJM65687.1}; TaxID=1144331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseud
bacterial regulatory s, luxR family protein
BD02T64_scaffold_111_47
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(54538..55215)
-----------------
DNA (678bp)
protein (226aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine
7-cyano-7-deazaguanine synthase n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KPI9_SIMAS
putative transcriptional regulator
BD02T64_scaffold_111_48
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(55250..55900)
-----------------
DNA (651bp)
protein (217aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis prote
7-carboxy-7-deazaguanine synthase n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S0H7_9GAMM rbh
radical activating enzyme
BD02T64_scaffold_111_49
Teredinibacter turnerae, Teredinibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56058..56864)
-----------------
DNA (807bp)
protein (269aa)
hypothetical protein n=1 Tax=Gilvimarinus chinensis RepID=UPI0003744F28
hypothetical protein
Tetratricopeptide protein {ECO:0000313|EMBL:ACR11419.1}; TaxID=377629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadales genera incertae sedis; Teredinibacter.;"
BD02T64_scaffold_111_50
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(56876..57391)
-----------------
DNA (516bp)
protein (172aa)
Outer membrane protein OprL n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQ54_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJS08681.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
peptidoglycan-associated lipoprotein
BD02T64_scaffold_111_51
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(57449..58732)
-----------------
DNA (1284bp)
protein (428aa)
Protein TolB n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQ55_9GAMM
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
tolB; translocation protein TolB
BD02T64_scaffold_111_52
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58782..59615)
-----------------
DNA (834bp)
protein (278aa)
Protein TolA n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=H8YHZ4_SIMAS
tolA; protein TolA
Protein TolA {ECO:0000313|EMBL:AFV00951.1}; TolA {ECO:0000313|EMBL:AFD30844.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agarivorans (strain D
BD02T64_scaffold_111_53
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59615..60046)
-----------------
DNA (432bp)
protein (144aa)
Biopolymer transport protein n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=I3WB82_SIMAS
tolR; biopolymer transport protein
Biopolymer transport protein {ECO:0000313|EMBL:AFV00950.1}; Biopolymer transport protein TolR {ECO:0000313|EMBL:AFK93836.1}; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simid
BD02T64_scaffold_111_54
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60051..60740)
-----------------
DNA (690bp)
protein (230aa)
protein tolQ n=1 Tax=gamma proteobacterium SCGC AAA160-D02 RepID=UPI00036555FA
Protein tolQ {ECO:0000313|EMBL:KJS08677.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
MotA/TolQ/ExbB proton channel
BD02T64_scaffold_111_55
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60782..61186)
-----------------
DNA (405bp)
protein (135aa)
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Alcanivorax sp. P2S70 RepID=U7G563_9GAMM
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:KJS08676.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
tol-pal system-associated acyl-CoA thioesterase
BD02T64_scaffold_111_56
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61183..62247)
-----------------
DNA (1065bp)
protein (355aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteri
Holliday junction DNA helicase RuvB n=1 Tax=gamma proteobacterium SCGC AAA160-D02 RepID=UPI00037BE1ED
ruvB; Holliday junction DNA helicase RuvB
BD02T64_scaffold_111_57
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62308..62907)
-----------------
DNA (600bp)
protein (200aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
hypothetical protein n=1 Tax=Dasania marina RepID=UPI00037655B5
ruvA; Holliday junction DNA helicase RuvA
BD02T64_scaffold_111_58
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62981..63499)
-----------------
DNA (519bp)
protein (173aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
ruvC; Holliday junction resolvase (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQ62_9GAMM rbh
BD02T64_scaffold_111_59
gamma proteobacterium IMCC3088, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63658..63849)
-----------------
DNA (192bp)
protein (64aa)
Putative uncharacterized protein n=1 Tax=gamma proteobacterium IMCC3088 RepID=F3KZI1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGG30528.1}; TaxID=876044 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma proteobacterium IMCC3088.;"
BD02T64_scaffold_111_60
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63910..64659)
-----------------
DNA (750bp)
protein (250aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AAA160-D02 RepID=UPI00035DB811
Probable transcriptional regulatory protein GP2143_10097 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marin
hypothetical protein
Displaying items 31-60 of 141 in total

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