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BD02T64_scaffold_111

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Displaying items 1-30 of 141 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_111_1
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..956)
DNA (954bp) protein (318aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
Queuine tRNA-ribosyltransferase n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KJ22_SIMAS
queuine tRNA-ribosyltransferase
BD02T64_scaffold_111_2
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1023..2066)
DNA (1044bp) protein (348aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000255|HAMAP-Rule:MF_00113}; EC=2.4.99.17 {ECO:0000255|HAMAP-Rule:MF_00113};; Queuosine biosynthesis protein QueA {ECO:0000255|HAMAP-Rule:M
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=QUEA_SACD2
S-adenosylmethionine
BD02T64_scaffold_111_3
unknown

Not on your lists

comp(2367..2513)
DNA (147bp) protein (49aa)

This feature has no annotations

BD02T64_scaffold_111_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2579..3616
DNA (1038bp) protein (346aa)
2-nitropropane dioxygenase NPD n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UWY3_VARPE
2-nitropropane dioxygenase npd
2-nitropropane dioxygenase NPD {ECO:0000313|EMBL:ADU36528.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax para
BD02T64_scaffold_111_5
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3686..6343)
DNA (2658bp) protein (886aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXY5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CAJ72888.1}; TaxID=174633 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="C
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
BD02T64_scaffold_111_6
RBG_16_Planctomycetes_41_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(6368..7279)
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B32D68 rbh
hypothetical protein Tax=RBG_16_Planctomycetes_41_13_curated
hypothetical protein
BD02T64_scaffold_111_7
unknown

Not on your lists

comp(7263..8555)
DNA (1293bp) protein (431aa)

This feature has no annotations

BD02T64_scaffold_111_8
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8762..9526)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI00037BD95F rbh
Peptidase S1 {ECO:0000313|EMBL:AKH19695.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
peptidase S1 and S6, chymotrypsin/Hap
BD02T64_scaffold_111_9
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9794..10672
DNA (879bp) protein (293aa)
udg; UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase n=1 Tax=Thauera sp. 63 RepID=N6Y1Z1_9RHOO
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:ENO76163.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
BD02T64_scaffold_111_10
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10673..10987
DNA (315bp) protein (105aa)
Nucleotide sugar dehydrogenase n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6XY08_9RHOO
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:EZQ13308.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas ba
UDP-glucose dehydrogenase
BD02T64_scaffold_111_11
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

10996..12048
DNA (1053bp) protein (351aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Sulfurospirillum barnesii (strain ATCC 700032 / DSM 10660 / SES-3) RepID=I3XYY5_SULBS
Capsule biosynthesis protein CapI {ECO:0000313|EMBL:KIM09980.1}; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
nucleoside-diphosphate-sugar epimerase
BD02T64_scaffold_111_12
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12079..14265)
DNA (2187bp) protein (729aa)
general secretion pathway protein D n=1 Tax=Marinobacterium stanieri RepID=UPI0002557C98
General secretion pathway protein D {ECO:0000313|EMBL:KEA62103.1}; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacterium.;" source="M
general secretion pathway protein D
BD02T64_scaffold_111_13
unknown

Not on your lists

comp(14316..14966)
DNA (651bp) protein (217aa)

This feature has no annotations

BD02T64_scaffold_111_14
Oceanimonas sp. GK1, Oceanimonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14963..15568)
DNA (606bp) protein (202aa)
General secretion pathway protein M n=1 Tax=Oceanimonas sp. (strain GK1) RepID=H2G0V0_OCESG
General secretion pathway protein M
General secretion pathway protein M {ECO:0000313|EMBL:AEY00189.1}; TaxID=511062 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Oceanimonas.;" source="Oceanimona
BD02T64_scaffold_111_15
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15561..16820)
DNA (1260bp) protein (420aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI00034B9756
fimbrial assembly family protein
Fimbrial assembly family protein {ECO:0000313|EMBL:ADE16674.1}; Flags: Precursor;; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" so
BD02T64_scaffold_111_16
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16823..17314)
DNA (492bp) protein (164aa)
Type II secretion system protein K n=2 Tax=Nitrosococcus oceani RepID=Q3JD26_NITOC
general secretion pathway protein K
General secretion pathway protein K {ECO:0000313|EMBL:ABA57270.1}; TaxID=323261 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococ
BD02T64_scaffold_111_17
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17256..17825)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI00037CE5DC
Uncharacterized protein {ECO:0000313|EMBL:ESQ13844.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source
type II secretory pathway, component PulK
BD02T64_scaffold_111_18
unknown

Not on your lists

comp(17822..18517)
DNA (696bp) protein (232aa)

This feature has no annotations

BD02T64_scaffold_111_19
R_Pseudomonas_63_210, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18514..19014)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI0002F918CC rbh
general secretion pathway protein H; K02458 general secretion pathway protein I Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated
general secretion pathway protein H
BD02T64_scaffold_111_20
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19011..19514)
DNA (504bp) protein (168aa)
Putative general secretion pathway protein H n=1 Tax=Pseudomonas sp. CFII68 RepID=S6I310_9PSED
General secretion pathway protein GspH {ECO:0000313|EMBL:KGI78562.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="
general secretion pathway protein H
BD02T64_scaffold_111_21
Pseudomonas sp. EGD-AK9, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19644..20099)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI0003823D30 rbh
Uncharacterized protein {ECO:0000313|EMBL:ERI51686.1}; TaxID=1386078 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. E
general secretion pathway protein G
BD02T64_scaffold_111_22
RLO_Pseudomonas_59_9, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20191..21411)
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI000380D587
type II secretion system F domain-containing protein; K02455 general secretion pathway protein F Tax=RifCSPlowO2_12_Pseudomonas_59_9_curated
type II secretion system F domain-containing protein
BD02T64_scaffold_111_23
Oceanimonas sp. GK1, Oceanimonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21411..23156)
DNA (1746bp) protein (582aa)
general secretion pathway protein E n=1 Tax=Oceanimonas smirnovii RepID=UPI000375384F rbh
general secretory pathway protein E
General secretory pathway protein E {ECO:0000313|EMBL:AEY00181.1}; TaxID=511062 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Oceanimonas.;" source="Oceanimona
BD02T64_scaffold_111_24
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23421..25808)
DNA (2388bp) protein (796aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AKR3_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO34688.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp.
hypothetical protein
BD02T64_scaffold_111_25
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25913..27547)
DNA (1635bp) protein (545aa)
Glycosyl transferase, family 4, conserved region-containing protein n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A1H1_METMM rbh
glycosyl transferase family protein
Glycosyl transferase, family 4, conserved region-containing protein {ECO:0000313|EMBL:AEF98864.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcacea
BD02T64_scaffold_111_26
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27649..29208)
DNA (1560bp) protein (520aa)
EpsI family protein n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E8G2_9GAMM rbh
EpsI family protein {ECO:0000313|EMBL:EGV27608.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii
EpsI family protein
BD02T64_scaffold_111_27
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(29343..30575)
DNA (1233bp) protein (411aa)
glycosyl transferase group 1 protein (EC:2.4.-.-)
Glycosyl transferase, group 1 {ECO:0000313|EMBL:CBK42110.1}; EC=2.4.-.- {ECO:0000313|EMBL:CBK42110.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source
Glycosyl transferase, group 1 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFS3_9BACT rbh
BD02T64_scaffold_111_28
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(30578..32254)
DNA (1677bp) protein (559aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFS2_9BACT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42109.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
BD02T64_scaffold_111_29
Endozoicomonas elysicola, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32279..32746)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Endozoicomonas elysicola RepID=UPI0003662CFC rbh
Recombinase {ECO:0000313|EMBL:KEI70751.1}; TaxID=305900 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas elysicola.;"
PilT protein-like protein
BD02T64_scaffold_111_30
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33246..35609)
DNA (2364bp) protein (788aa)
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39VJ0_GEOMG rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB31734.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallire
Displaying items 1-30 of 141 in total

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