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BD02T64_scaffold_211

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Displaying items 1-30 of 152 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_211_1

Not on your lists

comp(3..1634)
DNA (1632bp) protein (544aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI0003612840
Uncharacterized protein {ECO:0000313|EMBL:KKN52343.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ABC transport system, ATPase component
BD02T64_scaffold_211_2
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(1674..2630)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI00035F81A8
heavy metal efflux system, membrane fusion protein; K01993 HlyD family secretion protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
heavy metal efflux system, membrane fusion protein
BD02T64_scaffold_211_3
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2875..3414
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Glaciecola polaris LMG 21857 RepID=K7A1C1_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:CEA05045.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1
hypothetical protein
BD02T64_scaffold_211_4
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3473..3919)
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3J0U5_9GAMM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EGW20817.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylo
membrane protein
BD02T64_scaffold_211_5
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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3982..4776
DNA (795bp) protein (265aa)
Helix-turn-helix, AraC domain protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3J1P5_9GAMM rbh
Helix-turn-helix, AraC domain protein {ECO:0000313|EMBL:EGW19651.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Me
DNA-binding protein
BD02T64_scaffold_211_6
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

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5013..6785
DNA (1773bp) protein (591aa)
Putative multidrug export ATP-binding/permease protein {ECO:0000313|EMBL:ETN92501.1}; EC=3.6.3.- {ECO:0000313|EMBL:ETN92501.1};; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;"
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI00036D8562 rbh
ABC transporter ATP-binding/permease
BD02T64_scaffold_211_7
unknown

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comp(6796..7515)
DNA (720bp) protein (240aa)

This feature has no annotations

BD02T64_scaffold_211_8
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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7740..7910
DNA (171bp) protein (57aa)
Uncharacterized protein {ECO:0000313|EMBL:AII04048.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
BD02T64_scaffold_211_9
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7894..8625
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ETI0_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK52332.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestr
BD02T64_scaffold_211_10
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8738..9937
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00037E5436
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EZP82931.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="No
hypothetical protein
BD02T64_scaffold_211_11
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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10002..11186
DNA (1185bp) protein (395aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HV86_PARL1
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:GAK45902.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
acyl-CoA dehydrogenase domain-containing protein
BD02T64_scaffold_211_12
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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11240..12379
DNA (1140bp) protein (380aa)
acyl-CoA dehydrogenase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B3A2AB rbh
acyl-CoA dehydrogenase Tax=RBG_13_Deltaproteobacteria_43_22_curated
acyl-CoA dehydrogenase
BD02T64_scaffold_211_13
Methylophaga nitratireducenticrescens, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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12554..13165
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XI26_METNJ
hypothetical protein
Methylophaga nitratireducenticrescens strain JAM1, complete genome {ECO:0000313|EMBL:AFI84045.1}; Flags: Precursor;; TaxID=754476 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;
BD02T64_scaffold_211_14
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13840..14460)
DNA (621bp) protein (207aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=247633 species="Bacteria; Proteobacteria; Gammapr
Peptidyl-prolyl cis-trans isomerase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YFL7_9GAMM
FKBP-type peptidylprolyl isomerase
BD02T64_scaffold_211_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14621..15385
DNA (765bp) protein (255aa)
short-chain dehydrogenase n=1 Tax=Pseudomonas fluorescens RepID=UPI00035D4223
Uncharacterized protein {ECO:0000313|EMBL:KCZ73594.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;"
short-chain dehydrogenase/reductase SDR
BD02T64_scaffold_211_16
Paraglaciecola arctica, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15466..15840
DNA (375bp) protein (125aa)
Glutathione S-transferase {ECO:0000313|EMBL:GAC18136.1}; EC=2.5.1.18 {ECO:0000313|EMBL:GAC18136.1};; TaxID=493475 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadac
Glutathione S-transferase n=1 Tax=Glaciecola arctica BSs20135 RepID=K6Y2F4_9ALTE
glutathione S-transferase
BD02T64_scaffold_211_17
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16018..17619
DNA (1602bp) protein (534aa)
Acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta) n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2ILD1_9BURK
Acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta) {ECO:0000313|EMBL:EIF31533.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burk
carboxyl transferase domain protein
BD02T64_scaffold_211_18
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17684..19720
DNA (2037bp) protein (679aa)
biotin carboxylase subunit of acetyl-CoA carboxylase (EC:6.4.1.4)
Biotin carboxylase / biotin carboxyl carrier protein {ECO:0000313|EMBL:ABE30204.1}; EC=6.3.4.14 {ECO:0000313|EMBL:ABE30204.1};; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burk
Biotin carboxylase / biotin carboxyl carrier protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q140N5_BURXL
BD02T64_scaffold_211_19
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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19776..20927
DNA (1152bp) protein (384aa)
Acyl-CoA dehydrogenase n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TX02_9GAMM
Acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AGS39528.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticus
BD02T64_scaffold_211_20
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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21224..23608
DNA (2385bp) protein (795aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037998D3 rbh
PKD domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hypothetical protein
BD02T64_scaffold_211_21
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23813..25066
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI0003695FD2
Response regulator receiver modulated diguanylate cyclase {ECO:0000313|EMBL:CCK74356.1}; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleispira.;" source="Ol
rrpX; response regulator protein
BD02T64_scaffold_211_22
Pseudomonas mendocina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25079..25942)
DNA (864bp) protein (288aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltra
Release factor glutamine methyltransferase n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RMC7_9PSED rbh
prmC; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
BD02T64_scaffold_211_23
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25957..27039)
DNA (1083bp) protein (361aa)
peptide chain release factor 1 n=1 Tax=Dasania marina RepID=UPI00036EC5B0 rbh
bacterial peptide chain release factor 1 (bRF-1)
Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; A
BD02T64_scaffold_211_24
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27036..28391)
DNA (1356bp) protein (452aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=HEM1_SACD2
BD02T64_scaffold_211_25
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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28503..30296
DNA (1794bp) protein (598aa)
Uncharacterized protein n=1 Tax=Cellvibrio sp. BR RepID=I3I6J5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJS04979.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
TPR repeat-containing protein
BD02T64_scaffold_211_26

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30383..31048
DNA (666bp) protein (222aa)
Outer-membrane lipoprotein LolB n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=LOLB_CELJU
Uncharacterized protein {ECO:0000313|EMBL:KKL19016.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
lolB; outer membrane lipoprotein LolB
BD02T64_scaffold_211_27
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31055..31924
DNA (870bp) protein (290aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061};; 4-(cytidine-5'-dipho
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B33F3F
BD02T64_scaffold_211_28
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32055..32996
DNA (942bp) protein (314aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
prs; ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PJN7_CELJU
BD02T64_scaffold_211_29
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


33113..33766
DNA (654bp) protein (218aa)
50S ribosomal protein L25 n=1 Tax=gamma proteobacterium SCGC AAA160-D02 RepID=UPI00035FE8D3
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00147491}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023359}; TaxID=1629722 s
rplY; 50S ribosomal protein L25/general stress protein Ctc
BD02T64_scaffold_211_30
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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33814..34383
DNA (570bp) protein (190aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
hypothetical protein n=1 Tax=Gilvimarinus chinensis RepID=UPI00037A6927
Displaying items 1-30 of 152 in total

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