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BD02T64_scaffold_252

Search features with annotation key words

Displaying items 1-30 of 81 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_252_1
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(566..832)
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SM06_HAHCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC28318.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strai
BD02T64_scaffold_252_2
Glaciecola sp. 4H-3-7+YE-5, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1076..1633)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI00037A105D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE24166.1}; TaxID=983545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola sp. (str
BD02T64_scaffold_252_3
unknown

Not on your lists

comp(1885..2214)
DNA (330bp) protein (110aa)

This feature has no annotations

BD02T64_scaffold_252_4
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2774..3544)
DNA (771bp) protein (257aa)
3-beta-hydroxysteroid dehydrogenase n=1 Tax=Acetobacter pasteurianus RepID=UPI0002E78122
oxidoreductase Tax=RBG_13_Deltaproteobacteria_53_10_curated
short-chain dehydrogenase/reductase SDR
BD02T64_scaffold_252_5
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3608..4750)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YHH4_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EAW29705.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143.;"
hypothetical protein
BD02T64_scaffold_252_6
gamma proteobacterium IMCC2047, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5114..5503
DNA (390bp) protein (130aa)
tRNA 5-methylaminomethyl-2-thiouridine synthase TusD n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KDP4_9GAMM rbh
tRNA 5-methylaminomethyl-2-thiouridine synthase TusD {ECO:0000313|EMBL:EGG99509.1}; TaxID=434085 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium IMCC2047.;"
dsrE; hypothetical protein
BD02T64_scaffold_252_7
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5544..5879
DNA (336bp) protein (112aa)
DsrF protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YGR5_9GAMM
DsrF protein {ECO:0000313|EMBL:EAW29933.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143.;"
hypothetical protein
BD02T64_scaffold_252_8

Not on your lists

5879..6199
DNA (321bp) protein (107aa)
Intracellular sulfur oxidation protein DsrH n=1 Tax=uncultured bacterium ws085G8 RepID=I1X5A7_9BACT
Intracellular sulfur oxidation protein DsrH {ECO:0000313|EMBL:AFI78682.1}; TaxID=1131825 species="Bacteria; environmental samples.;" source="uncultured bacterium ws085G8.;"
sulfur relay protein TusB/DsrH
BD02T64_scaffold_252_9
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6332..6649
DNA (318bp) protein (106aa)
Sulfurtransferase {ECO:0000256|PIRNR:PIRNR006223}; EC=2.8.1.- {ECO:0000256|PIRNR:PIRNR006223};; TaxID=1117647 species="Bacteria; Proteobacteria; Gammaproteobacteria; Simiduia.;" source="Simiduia agari
DsrC family protein n=1 Tax=Microbulbifer variabilis RepID=UPI000378A8C6 rbh
dissimilatory sulfite reductase (desulfoviridin) subunit gamma
BD02T64_scaffold_252_10
unknown

Not on your lists

6799..6933
DNA (135bp) protein (45aa)

This feature has no annotations

BD02T64_scaffold_252_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7555..8769)
DNA (1215bp) protein (405aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IT20_RHOP2 rbh
L-carnitine dehydratase/bile acid-inducible protein F
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ABD08640.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomon
BD02T64_scaffold_252_12
Shewanella putrefaciens, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8895..9251)
DNA (357bp) protein (119aa)
HNH endonuclease n=3 Tax=Shewanella RepID=A1RLD5_SHESW
hypothetical protein
HNH endonuclease {ECO:0000313|EMBL:ADV53919.1}; TaxID=399804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella putrefaciens (str
BD02T64_scaffold_252_13
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(9513..9887)
DNA (375bp) protein (125aa)
hypothetical protein id=14425785 bin=bin1_lowGC species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein Tax=CSP1_2_Dadabacteria
conserved hypothetical protein
BD02T64_scaffold_252_14
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9962..11458)
DNA (1497bp) protein (499aa)
aldehyde dehydrogenase (EC:1.2.1.3)
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO44004.1}; EC=1.2.1.3 {ECO:0000313|EMBL:BAO44004.1};; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037B62B9
BD02T64_scaffold_252_15

Not on your lists

comp(11671..12075)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Teredinibacter turnerae RepID=UPI0003735ACA
Uncharacterized protein {ECO:0000313|EMBL:KKL16087.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BD02T64_scaffold_252_16
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12168..13265
DNA (1098bp) protein (366aa)
tRNA (uracil-5-)-methyltransferase (EC:2.1.1.35)
tRNA/tmRNA (uracil-C(5))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}; EC=2.1.1.35 {ECO:0000256|HAMAP-Rule:MF_01011};; tRNA (uracil(54)-C(5))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}
tRNA/tmRNA (uracil-C(5))-methyltransferase n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KG58_SIMAS
BD02T64_scaffold_252_17
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13271..13765)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTF3_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EAS47534.1}; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" source="gamma proteobacterium HTCC2207.;"
hypothetical protein
BD02T64_scaffold_252_18
Endozoicomonas numazuensis, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13814..14764)
DNA (951bp) protein (317aa)
Auxin efflux carrier n=1 Tax=Marinobacter sp. BSs20148 RepID=M1FEZ8_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KEQ19249.1}; TaxID=1137799 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas nu
auxin efflux carrier
BD02T64_scaffold_252_19
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14801..16120)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTF2_9GAMM
DNA recombination protein RmuC {ECO:0000313|EMBL:ETN92409.1}; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MOLA455.;"
RmuC domain-containing protein family
BD02T64_scaffold_252_20
gamma proteobacterium IMCC1989, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16287..17096
DNA (810bp) protein (270aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=937772 species="Bacteria; Prote
murI; glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=gamma proteobacterium IMCC1989 RepID=F3LCG5_9GAMM rbh
BD02T64_scaffold_252_21
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17110..18501)
DNA (1392bp) protein (464aa)
Sporulation domain-containing protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AF07_9PROT
General secretion pathway protein {ECO:0000313|EMBL:GAO35885.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuri
sporulation domain-containing protein
BD02T64_scaffold_252_22
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18589..19326)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TUZ9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS38900.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticu
BD02T64_scaffold_252_23
endosymbiont of Tevnia jerichonana, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19372..19998)
DNA (627bp) protein (209aa)
Prokaryotic N-methylation site n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FBS4_9GAMM
Prokaryotic N-methylation site {ECO:0000313|EMBL:EGW55755.1}; TaxID=1049564 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Tevnia jericho
N-methylation domain-containing protein
BD02T64_scaffold_252_24
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20212..21009)
DNA (798bp) protein (266aa)
Uncharacterized protein id=1849059 bin=GWE2_Gallionellales_58_10 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
hypothetical protein Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
General secretion pathway protein H
BD02T64_scaffold_252_25
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21031..21714)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TDM5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS38897.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticu
BD02T64_scaffold_252_26
unknown

Not on your lists

comp(21784..22290)
DNA (507bp) protein (169aa)

This feature has no annotations

BD02T64_scaffold_252_27
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22287..22925)
DNA (639bp) protein (213aa)
TrkA-N domain protein n=2 Tax=sulfur-oxidizing symbionts RepID=G2DGC6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EGV50319.1}; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (ve
hypothetical protein
BD02T64_scaffold_252_28
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22925..24490)
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5T5R5_9GAMM
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
hypothetical protein
BD02T64_scaffold_252_29
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24490..25695)
DNA (1206bp) protein (402aa)
Type II secretory pathway, component PulF n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TV42_9GAMM
Type II secretory pathway, component PulF
Type II secretory pathway, component PulF {ECO:0000313|EMBL:AGS38893.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" sou
BD02T64_scaffold_252_30
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25698..27407)
DNA (1710bp) protein (570aa)
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TDM1_9GAMM
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB {ECO:0000313|EMBL:AGS38892.1}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Pisci
Displaying items 1-30 of 81 in total

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