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BD02T64_scaffold_329

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Displaying items 1-30 of 159 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_329_1
Simiduia agarivorans, Simiduia, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..716)
DNA (714bp) protein (238aa)
seryl-tRNA ligase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
Serine--tRNA ligase n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KV60_SIMAS
BD02T64_scaffold_329_2
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(788..1159)
DNA (372bp) protein (124aa)
Putative fluoride ion transporter CrcB n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTK7_9GAMM
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
crcB; CrcB protein
BD02T64_scaffold_329_3
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1147..2526)
DNA (1380bp) protein (460aa)
ATPase, AAA family domain protein n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PL40_CELJU rbh
Recombination factor protein RarA {ECO:0000313|EMBL:KJS05775.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
ATPase, AAA family domain-containing protein rbh
BD02T64_scaffold_329_4
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2519..3235)
DNA (717bp) protein (239aa)
Periplasmic chaperone LolA n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTK5_9GAMM
Outer-membrane lipoprotein carrier protein {ECO:0000256|HAMAP-Rule:MF_00240, ECO:0000256|SAAS:SAAS00028972}; Flags: Precursor;; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;"
membrane protein
BD02T64_scaffold_329_5
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3180..5486)
DNA (2307bp) protein (769aa)
Cell division FtsK/SpoIIIE protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTK0_9GAMM
Cell division protein FtsK {ECO:0000313|EMBL:KJS05776.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
ftsK; DNA translocase ftsK rbh
BD02T64_scaffold_329_6
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5748..6695
DNA (948bp) protein (316aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria
thioredoxin reductase n=1 Tax=Spongiibacter tropicus RepID=UPI0003B407C1
thioredoxin-disulfide reductase
BD02T64_scaffold_329_7
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6778..7500
DNA (723bp) protein (241aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transf
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTJ8_9GAMM
BD02T64_scaffold_329_8
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7579..8298
DNA (720bp) protein (240aa)
Arginyltransferase (EC:2.3.2.8)
Putative arginyl-tRNA--protein transferase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTJ7_9GAMM
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:00002
BD02T64_scaffold_329_9

Not on your lists

8559..8777
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Bermanella marisrubri RepID=Q1N4M9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKL55912.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
infA; translation initiation factor IF-1
BD02T64_scaffold_329_10
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8956..11226)
DNA (2271bp) protein (757aa)
ATP-dependent Clp protease ATP-binding subunit ClpA (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Gilvimarinus chinensis RepID=UPI00036A2D0F
Clp protease ClpX {ECO:0000313|EMBL:KJS05781.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
BD02T64_scaffold_329_11
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11239..11610)
DNA (372bp) protein (124aa)
ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21K33_SACD2
ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagu
BD02T64_scaffold_329_12

Not on your lists

11885..12169
DNA (285bp) protein (95aa)
DNA-binding protein n=1 Tax=Microbulbifer agarilyticus RepID=UPI000255B783
Uncharacterized protein {ECO:0000313|EMBL:KKL75836.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cold-shock DNA-binding protein family protein
BD02T64_scaffold_329_13
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12384..13016
DNA (633bp) protein (211aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteri
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI00037A6EB1
Pseudouridine synthase
BD02T64_scaffold_329_14
Pseudomonas psychrotolerans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13076..13522
DNA (447bp) protein (149aa)
NUDIX hydrolase n=1 Tax=Pseudomonas sp. 313 RepID=UPI0002DDF221 rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK73072.1}; TaxID=1112217 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomo
NUDIX family hydrolase
BD02T64_scaffold_329_15

Not on your lists

13568..14686
DNA (1119bp) protein (373aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PKX7_CELJU
Uncharacterized protein {ECO:0000313|EMBL:KKL76915.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BD02T64_scaffold_329_16
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14749..15393
DNA (645bp) protein (215aa)
DNA repair protein HhH-GPD n=1 Tax=Microbulbifer variabilis RepID=UPI0003620211
High frequency lysogenization protein HflD homolog {ECO:0000256|HAMAP-Rule:MF_00695}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_
protein of unknown function DUF489
BD02T64_scaffold_329_17
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15583..16950
DNA (1368bp) protein (456aa)
purB; adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
Adenylosuccinate lyase n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PKX9_CELJU
BD02T64_scaffold_329_18
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16951..18168
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Cellvibrio sp. BR RepID=I3I973_9GAMM
Cupin {ECO:0000313|EMBL:KJS05789.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
BD02T64_scaffold_329_19
uncultured gamma proteobacterium HF4000_19M20, Gammaproteobacteria, Proteobacteria, Bacteria

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18287..19099
DNA (813bp) protein (271aa)
NTP pyrophosphohydrolases including oxidative damage repair enzymes n=1 Tax=uncultured gamma proteobacterium HF4000_19M20 RepID=E0XVS1_9GAMM
NTP pyrophosphohydrolases including oxidative damage repair enzymes {ECO:0000313|EMBL:ADI18512.1}; TaxID=710987 species="Bacteria; Proteobacteria; Gammaproteobacteria; environmental samples.;" source=
hypothetical protein
BD02T64_scaffold_329_20
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19115..19945
DNA (831bp) protein (277aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FG80_DESAA
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ACL03760.1}; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="De
BD02T64_scaffold_329_21
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20046..20858
DNA (813bp) protein (271aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Burkholderia sp. H160 RepID=B5WCE8_9BURK
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EEA04065.1}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia
BD02T64_scaffold_329_22
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20981..21436)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Nocardia sp. 348MFTsu5.1 RepID=UPI00035EBF1E
Uncharacterized protein {ECO:0000313|EMBL:KHS46076.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
BD02T64_scaffold_329_23
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21634..22272
DNA (639bp) protein (213aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI000373BFCF rbh
peptide methionine sulfoxide reductase
BD02T64_scaffold_329_24
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22394..23263)
DNA (870bp) protein (290aa)
Putative universal stress protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRV7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJS09698.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
hypothetical protein
BD02T64_scaffold_329_25
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23424..24689
DNA (1266bp) protein (422aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS09699.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
BD02T64_scaffold_329_26
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24762..25478
DNA (717bp) protein (239aa)
Cyclic nucleotide-binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RX34_9GAMM
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KJS09700.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
transcriptional activator protein anr
BD02T64_scaffold_329_27

Not on your lists

comp(25807..25911)
DNA (105bp) protein (35aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK58358.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BD02T64_scaffold_329_28
endosymbiont of Tevnia jerichonana, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26797..28215
DNA (1419bp) protein (473aa)
Serine/threonine-protein kinase PknB {ECO:0000313|EMBL:EGW55288.1}; EC=2.7.11.1 {ECO:0000313|EMBL:EGW55288.1};; TaxID=1049564 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing s
Serine/threonine-protein kinase PknB n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FCQ8_9GAMM rbh
serine/threonine protein kinase
BD02T64_scaffold_329_29
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28756..29637)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BXP5_NITHN rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE14003.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophil
BD02T64_scaffold_329_30
unknown

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comp(30120..31070)
DNA (951bp) protein (317aa)

This feature has no annotations

Displaying items 1-30 of 159 in total

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