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BD02T64_scaffold_2251

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2251_1
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(293..1123)
DNA (831bp) protein (277aa)
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACL02602.1}; EC=1.1.1.35 {ECO:0000313|EMBL:ACL02602.1};; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterale
Short-chain dehydrogenase/reductase SDR n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FI35_DESAA
short-chain dehydrogenase/reductase SDR
BD02T64_scaffold_2251_2
gamma proteobacterium NOR5-3, Gammaproteobacteria, Proteobacteria, Bacteria

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1435..2670
DNA (1236bp) protein (412aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KH40_9GAMM rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:EED33156.1}; TaxID=566466 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium NOR5-3.;"
acyl-CoA dehydrogenase domain-containing protein
BD02T64_scaffold_2251_3
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

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2709..3851
DNA (1143bp) protein (381aa)
Putative acyl-CoA dehydrogenase family protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YFB3_9GAMM
Putative acyl-CoA dehydrogenase family protein {ECO:0000313|EMBL:EAW30327.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteo
acyl-CoA dehydrogenase domain-containing protein
BD02T64_scaffold_2251_4

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comp(3960..4442)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000381670D
Marine sediment metagenome DNA, contig: S01H1_L04922 {ECO:0000313|EMBL:GAF73058.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
BD02T64_scaffold_2251_5
Aeromonas salmonicida, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4753..5847
DNA (1095bp) protein (365aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
fabH2; 3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Aeromonas salmonicida subsp. pectinolytica 34mel RepID=T0PK78_AERSA
BD02T64_scaffold_2251_6
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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5952..9470
DNA (3519bp) protein (1173aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobac
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III subunit alpha n=1 Tax=Microbulbifer agarilyticus RepID=UPI000255B849
BD02T64_scaffold_2251_7
gamma proteobacterium IMCC1989, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9601..10548
DNA (948bp) protein (316aa)
accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
acetyl-CoA carboxylase subunit alpha n=1 Tax=Gilvimarinus chinensis RepID=UPI00035FE8CA
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=
BD02T64_scaffold_2251_8

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comp(10625..11467)
DNA (843bp) protein (281aa)
Nuclease, SNase family n=2 Tax=Pseudomonas RepID=I2BZH2_PSEFL rbh
Uncharacterized protein {ECO:0000313|EMBL:KKL86740.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
nuclease, SNase family
BD02T64_scaffold_2251_9
gamma proteobacterium IMCC1989, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11493..11711)
DNA (219bp) protein (73aa)
50S ribosomal protein L31 n=1 Tax=gamma proteobacterium IMCC1989 RepID=F3LF44_9GAMM
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=937772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales.;" source="gamma proteo
LSU ribosomal protein L31P
BD02T64_scaffold_2251_10
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11992..14205
DNA (2214bp) protein (738aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1134474 species="Bacteria;
Primosomal protein N n=1 Tax=Cellvibrio sp. BR RepID=I3I616_9GAMM
priA; primosomal protein N`
BD02T64_scaffold_2251_11
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14290..14904
DNA (615bp) protein (205aa)
Sporulation related n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21H73_SACD2
Sporulation related
Sporulation related {ECO:0000313|EMBL:ABD81956.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharophagus degr
BD02T64_scaffold_2251_12
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15004..16821)
DNA (1818bp) protein (606aa)
Putative monooxygenase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCQ6_PHEZH
monooxygenase
Putative monooxygenase {ECO:0000313|EMBL:ACG78243.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacteri
BD02T64_scaffold_2251_13
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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17280..17618
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21MZ2_SACD2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD79937.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharophagus
BD02T64_scaffold_2251_14
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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17648..18574
DNA (927bp) protein (309aa)
SAM-dependent methyltransferase n=1 Tax=Pseudomonas stutzeri (strain ATCC 17588 / DSM 5190 / CCUG 11256 / JCM 5965 / LMG 11199 / NCIMB 11358 / Stanier 221) RepID=F8H7C6_PSEUT rbh
SAM-dependent methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:AEJ06172.1}; TaxID=96563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
BD02T64_scaffold_2251_15

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comp(18606..19094)
DNA (489bp) protein (163aa)
Ribonuclease E inhibitor RraA n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KFP2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKL94667.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rraA; ribonuclease activity regulator protein RraA
BD02T64_scaffold_2251_16
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19244..19585
DNA (342bp) protein (114aa)
Para-aminobenzoate synthase component I n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTT5_9GAMM
Para-aminobenzoate synthase component I {ECO:0000313|EMBL:EAS47402.1}; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" source="gamma proteobacterium HTCC
BD02T64_scaffold_2251_17
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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19552..20547
DNA (996bp) protein (332aa)
Para-aminobenzoate synthase component I n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTT5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJS05259.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
aminodeoxychorismate synthase subunit I
BD02T64_scaffold_2251_18
unknown

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20709..20903
DNA (195bp) protein (65aa)

This feature has no annotations

BD02T64_scaffold_2251_19
Pseudomonas sp. UW4, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21007..21627)
DNA (621bp) protein (207aa)
thrH; phosphoserine phosphatase (EC:3.1.3.3)
Phosphoserine phosphatase {ECO:0000313|EMBL:AFY20856.1}; EC=3.1.3.3 {ECO:0000313|EMBL:AFY20856.1};; TaxID=1207075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadac
Phosphoserine phosphatase n=1 Tax=Pseudomonas sp. UW4 RepID=K9NLB9_9PSED
BD02T64_scaffold_2251_20
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21823..22320)
DNA (498bp) protein (166aa)
CysB family transcriptional regulator n=1 Tax=Spongiibacter tropicus RepID=UPI0003B51EA4
CysB family transcriptional regulator {ECO:0000313|EMBL:KJS10008.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
cysB; CysB family transcriptional regulator
BD02T64_scaffold_2251_21
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22320..22754)
DNA (435bp) protein (145aa)
Transcriptional regulator CysB n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PGU1_CELJU
CysB family transcriptional regulator {ECO:0000313|EMBL:KJS10008.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
cysB; transcriptional regulator CysB
BD02T64_scaffold_2251_22
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22869..23657
DNA (789bp) protein (263aa)
Membrane protein, putative n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTN2_9GAMM
Membrane protein {ECO:0000313|EMBL:KJS10009.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
protein of unknown function DUF81
BD02T64_scaffold_2251_23
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23692..24606)
DNA (915bp) protein (305aa)
ushA; 5'-nucleotidase (EC:3.1.3.5)
5-nucleotidase n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PGU2_CELJU
5'-nucleotidase {ECO:0000313|EMBL:KJS08164.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
BD02T64_scaffold_2251_24
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24678..26030)
DNA (1353bp) protein (451aa)
Amino acid carrier protein n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y754_THIV6
amino acid carrier protein
Amino acid carrier protein {ECO:0000313|EMBL:AFL72822.1}; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens
BD02T64_scaffold_2251_25
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26104..27144)
DNA (1041bp) protein (347aa)
D-cysteine desulfhydrase {ECO:0000313|EMBL:EAS47451.1}; EC=4.4.1.15 {ECO:0000313|EMBL:EAS47451.1};; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" sourc
Pyridoxal phosphate-dependent deaminase (EC:3.5.99.7)
D-cysteine desulfhydrase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTN6_9GAMM
BD02T64_scaffold_2251_26
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27257..27586)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AAA300-D14 RepID=UPI00036731DA
Preprotein translocase subunit YajC {ECO:0000313|EMBL:ETN92325.1}; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MOLA455.;"
protein translocase subunit yajC
BD02T64_scaffold_2251_27
Bacteriovorax sp. BAL6_X, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27658..28137)
DNA (480bp) protein (160aa)
thioredoxin-dependent thiol peroxidase n=1 Tax=Microbulbifer agarilyticus RepID=UPI000255B60A
Redoxin {ECO:0000313|EMBL:EPZ52335.1}; TaxID=1201290 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. BAL6_X.;"
bcp; bacterioferritin comigratory protein
BD02T64_scaffold_2251_28
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28256..29236)
DNA (981bp) protein (327aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|RuleBase:RU000422}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|RuleBase:RU000422};; TaxID=1411685 species="Bacteria; P
Malate dehydrogenase n=1 Tax=Alcanivorax sp. PN-3 RepID=U7I037_9GAMM rbh
mdh; malate dehydrogenase
BD02T64_scaffold_2251_29
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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29907..30578
DNA (672bp) protein (224aa)
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F5H6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KJE45370.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)
Displaying 29 items

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