ggKbase home page

BD02T64_scaffold_2549

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BD02T64_scaffold_2549_1
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..365)
DNA (363bp) protein (121aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.
phosphoenolpyruvate carboxylase n=1 Tax=Arhodomonas aquaeolei RepID=UPI0003781CF8
hypothetical protein
BD02T64_scaffold_2549_2
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

628..1725
DNA (1098bp) protein (366aa)
Fic family protein n=1 Tax=Osedax symbiont Rs1 RepID=S6GDB8_9GAMM rbh
Fic family protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
BD02T64_scaffold_2549_3
Osedax symbiont Rs1, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1870..2220
DNA (351bp) protein (117aa)
nucleotide pyrophosphohydrolase n=1 Tax=Pseudomonas caeni RepID=UPI0003B58A81 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ49411.1}; TaxID=1330036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
hypothetical protein
BD02T64_scaffold_2549_4
Marinomonas sp. S3726, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2238..4622
DNA (2385bp) protein (795aa)
ATPase AAA n=1 Tax=Pseudomonas caeni RepID=UPI0003B3AD54 rbh
ATPase AAA {ECO:0000313|EMBL:KJZ08823.1}; TaxID=579484 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas sp. S3726.;"
hypothetical protein
BD02T64_scaffold_2549_5
gamma proteobacterium HTCC2207, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4775..5761
DNA (987bp) protein (329aa)
Quinone oxidoreductase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YS79_9GAMM
Quinone oxidoreductase {ECO:0000313|EMBL:EAS47327.1}; TaxID=314287 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; SAR92 clade.;" source="gamma proteobacterium HTCC2207.;"
NAD(P)H quinone oxidoreductase
BD02T64_scaffold_2549_6

Not on your lists

5779..6105
DNA (327bp) protein (109aa)
Translation initiation factor 1 (EIF-1/SUI1) n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21HI9_SACD2
Uncharacterized protein {ECO:0000313|EMBL:KKK76892.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
translation initiation factor 1 (eIF-1/SUI1)
BD02T64_scaffold_2549_7
Synechococcus sp. JA-2-3B'a(2-13), Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

6107..8116
DNA (2010bp) protein (670aa)
S9C family peptidase (EC:3.4.-.-)
Peptidase, S9C (Acylaminoacyl-peptidase) family {ECO:0000313|EMBL:ABD02964.1}; EC=3.4.-.- {ECO:0000313|EMBL:ABD02964.1};; TaxID=321332 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococ
Peptidase, S9C (Acylaminoacyl-peptidase) family n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JK37_SYNJB
BD02T64_scaffold_2549_8
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8125..8631
DNA (507bp) protein (169aa)
transcription elongation factor GreB n=1 Tax=Spongiibacter tropicus RepID=UPI0003B54964
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteob
greB; transcription elongation factor GreB
BD02T64_scaffold_2549_9
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8635..9996)
DNA (1362bp) protein (454aa)
HD domain protein n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PL59_CELJU
HD domain-containing protein
HD domain protein {ECO:0000313|EMBL:ACE84291.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicus (str
BD02T64_scaffold_2549_10
Pseudomonas sp. 2(2015), Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10228..12426)
DNA (2199bp) protein (733aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003799632
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:KJK15496.1}; TaxID=1619950 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
diguanylate cyclase
BD02T64_scaffold_2549_11

Not on your lists

12787..13272
DNA (486bp) protein (162aa)
UPF0234 protein Shewana3_0782 n=2 Tax=Shewanella RepID=A0KTA1_SHESA
Uncharacterized protein {ECO:0000313|EMBL:KKL50376.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative nucleotide-binding protein
BD02T64_scaffold_2549_12

Not on your lists

comp(13297..14067)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00036D9D8A
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:AIF04103.1}; TaxID=1457927 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3
dehydrogenase
BD02T64_scaffold_2549_13
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14254..15294
DNA (1041bp) protein (347aa)
5,10-methylenetetrahydromethanopterin reductase n=1 Tax=gamma proteobacterium BDW918 RepID=I2JHU4_9GAMM
5,10-methylenetetrahydromethanopterin reductase {ECO:0000313|EMBL:EIF42546.1}; TaxID=1168065 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium BDW918.;"
putative F420-dependent oxidoreductase
BD02T64_scaffold_2549_14
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15392..16444)
DNA (1053bp) protein (351aa)
Aminoglycoside phosphotransferase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQT9_PARL1
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ABS62272.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum la
BD02T64_scaffold_2549_15
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16544..17395
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YAK2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAW33156.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143.;"
luciferase family protein
Displaying 15 items

View Taxonomy